Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1879 ATGGCCAACGCATTCTCTCTTCTCCCTCTTCTTCTCTCCCTCTTCTGCATCGCCGCCATATCCAACCTCGCCATCGCCGATTCCTCCTCCTCCTCCAACTTCATCAAATACTCCTGCAGCGCCACCCAATACCCCTCCCTCTGCGTCGAATCCCTCTCCGTCTACGCCTCCACCATCCAGCAAGACCCGCACCTGCTTGTCGAGACCGCCCTCTCGCTCAGCCTCAACCGCACCCTCGCGACCCGCGCCTTCGTCGCCAAGCTCAACAAGTTCAAGGGCCTCAACCCCCGAGAAACCGCCGCTCTCAAGGACTGCGTCGAGGAGATCTCCGATAGCGTCGACAGGCTCAGTCGATCTCTGAAGGAGCTCAAGCTGTGCAGATCCAAGGGTGAGGATTTCACCTGGCACATGAGTAATGTGGAGACGTGGGTTAGTTCCGCCTTGACCGATGAGAGCACTTGCAGCGATGGGTTCGCCGGAAAGGCCTTGGATGGGAAGGTCAAGGCTTCGATTAGAGCCAGAATGGTTAATGTAGCTCAGGTCACGAGTAATGCTCTCTCGCTCATCAACAACTATGCTGCGTCTAACCCCTGA 594 0.5707 MANAFSLLPLLLSLFCIAAISNLAIADSSSSSNFIKYSCSATQYPSLCVESLSVYASTIQQDPHLLVETALSLSLNRTLATRAFVAKLNKFKGLNPRETAALKDCVEEISDSVDRLSRSLKELKLCRSKGEDFTWHMSNVETWVSSALTDESTCSDGFAGKALDGKVKASIRARMVNVAQVTSNALSLINNYAASNP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1879 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 188 - -
Bisa12g1879 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 192 IPR035513 -
Bisa12g1879 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 192 IPR035513 -
Bisa12g1879 197 NCBIfam pectinesterase inhibitor domain 1 192 IPR006501 GO:0004857
Bisa12g1879 197 FunFam Pectin methylesterase inhibitor 1 30 192 - -
Bisa12g1879 197 Pfam Plant invertase/pectin methylesterase inhibitor 33 188 IPR006501 GO:0004857
Bisa12g1879 197 CDD PMEI-like_3 38 194 - -
Bisa12g1879 197 SMART PMEI_2 30 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1879 Bisa-ChrBisa12 42020522 42021115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1879 28 191 Carbohydrate Esterase AT3G14310 33.929 6.50e-24 96.7