Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa12g1871 | ATGGGAAGGCTATTTTTCTTGAGTCTCATTCTATTGGCTTGTACCCTTCCAATTGTCACATCAAGAAGATCAAGAAAAAGATCCTCTAGCGACATCAACTGGTGGTGCGATCGAACGCCGCACCCCGAGCCATGCAAATATTACATGGGCCCTCGCCCTGGGTTTCGGCCCAAGCACAAGTCACAATTCCGCGGGATGCTGGTTCAACTAACCCTGGACCAGGCCCAGCACATGCAAGCCCAAGCCCAAGGCTACGCTCAGAACTGCGAGACCGAGAAGGAAAAGGCCGTCTACAGCGACTGCTTGACGCTCTACGACAACACCATACTCCAACTGAACCGAACGTACCAAGGCCTCATGGCAAAATGA | 369 | 0.523 | MGRLFFLSLILLACTLPIVTSRRSRKRSSSDINWWCDRTPHPEPCKYYMGPRPGFRPKHKSQFRGMLVQLTLDQAQHMQAQAQGYAQNCETEKEKAVYSDCLTLYDNTILQLNRTYQGLMAK | 122 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa12g1871 | 122 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 30 | 119 | IPR035513 | - | |
| Bisa12g1871 | 122 | Pfam | Plant invertase/pectin methylesterase inhibitor | 31 | 117 | IPR006501 | GO:0004857 | |
| Bisa12g1871 | 122 | Coils | Coil | 109 | 122 | - | - | |
| Bisa12g1871 | 122 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 26 | 122 | IPR035513 | - | |
| Bisa12g1871 | 122 | NCBIfam | pectinesterase inhibitor domain | 7 | 120 | IPR006501 | GO:0004857 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa12g1871 | Bisa-ChrBisa12 | 40875833 | 40876201 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa12g1871 | 14 | 122 | Carbohydrate Esterase | AT5G51490 | 41.818 | 3.93e-24 | 94.0 |