Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1867 ATGGCCTCTGCAATTAACCATGGACTCAAAAGAAGAGAGGTAGAGAATATGAATTCTTTTTCTTATGTTCCCCCTGGATTTAGGTTCCATCCCACAGATGAAGAACTTGTGGATTACTACCTTAGGAAGAAAGTCACTTCAAGGAGGATTGACCTTAATGTCATCAAAGATGTGGACCTCTACAAAATTGAGCCATGGGACCTTCAAGAGATATGCAGAATAGGAACAGAAGAGCAAAACGAATGGTACTTCTTTAGCCACAAAGATAAGAAGTATCCAACAGGGACTCGCACAAATAGGGCAACAGCAGCAGGGTTCTGGAAGGCGACAGGAAGGGACAAGGCCATCTACTCCAAGCATGACCTCATTGGGATGAGGAAGACCTTAGTTTTCTACAAAGGTCGAGCTCCAAATGGCCAGAAATCTGATTGGATTATGCATGAGTATCGTCTTGAAACTGATGAAAATGGCACCCCACAGGAAGAAGGATGGGTAGTGTGTAGAGTGTTCAAGAAGAGAATAACAACGATGCGCAAAGTGAGCGAGCATGAGTCTCCTTGTTGGTATGATGACCAACAAGTCTCCAATTTCATTCAAGACTTGGACTCCCCAAAGCAAAACCCTCCTCATGATCATATTCATCATCATTCTCAATCTCACCCAAATTTGATCTACCACCACCACCACCACCTCCCTCTCAATAATTATCCTTGCAAGCAAGAGCTAGATCATCATCTCCCATTAATAGGCCACCACCGCCTCCCGATTCGCCACCCCTTTCTCCCCCAGCTTCAGCTTCTCGATCATCACATTCACACTCCCAAATTGTTTCAGGATAATAACCCTATCCCTATCCCTGTGCCACCATGTGGGCTTGATCATCTCATAAACCATGCCCTAGGACATGATAATCAACAAAATTTTCAGGCTGTCTATGGTGGCTCTAATAGCCAAGAACACGTAGTCATTGACGATCAAGTGACCGATTGGCGAGTGCTCGACAAGTTTGTGGCTTCGCAACTTAGTCAAGATCAAGATATTGTTGCTAATAAGGATCTTCACACCAATGCAGGCACAAGCAGCAGCACCAACAATAATATCTTTCACACAATGGACAATGTTGCTAATGATAATGTCTCAACTTTGGAAAAGCAAGAAATGGTGGTGCCTGAAAATGTCTCAACATCAACCTCAAGTTGCCCAATTGATTTGTGGAAATAG 1221 0.4373 MASAINHGLKRREVENMNSFSYVPPGFRFHPTDEELVDYYLRKKVTSRRIDLNVIKDVDLYKIEPWDLQEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTMRKVSEHESPCWYDDQQVSNFIQDLDSPKQNPPHDHIHHHSQSHPNLIYHHHHHLPLNNYPCKQELDHHLPLIGHHRLPIRHPFLPQLQLLDHHIHTPKLFQDNNPIPIPVPPCGLDHLINHALGHDNQQNFQAVYGGSNSQEHVVIDDQVTDWRVLDKFVASQLSQDQDIVANKDLHTNAGTSSSTNNNIFHTMDNVANDNVSTLEKQEMVVPENVSTSTSSCPIDLWK 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1867 406 ProSiteProfiles NAC domain profile. 23 172 IPR003441 GO:0003677|GO:0006355
Bisa12g1867 406 Pfam No apical meristem (NAM) protein 24 151 IPR003441 GO:0003677|GO:0006355
Bisa12g1867 406 SUPERFAMILY NAC domain 20 172 IPR036093 GO:0003677|GO:0006355
Bisa12g1867 406 FunFam NAC domain-containing protein 32 176 - -
Bisa12g1867 406 Gene3D NAC domain 32 175 IPR036093 GO:0003677|GO:0006355
Bisa12g1867 406 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1867 Bisa-ChrBisa12 40623741 40626019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1867 17 406 NAC Transcription Factor Family AT1G12260 51.637 4.52e-129 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa12g1867 NAM 5.6e-38 No_clan