Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1864 ATGGACCTGAAGTCAAATCATACCCCTGTTCTGACTGATGCTGCACCCATAACAAAATCAAGACTGGGTGTTCATTCCAGTCTGTTGCCTTATTCTCCTACAGGGGCAGCTTTTCCACACAGTCTATTTCTGACAATCCCAAGGAAGAAGACAGGAATTCTTGAAGATGTTCGTTCAAGTGGTTGGCTGGATGCCATGAAATCATCTTCTCCTACAGCCAAGAAGATAACAAAGGATATTAATCATGGGTTTGCATCATCTGATGTTGATAGTGCTTACTGTACCTGGCTGCTAAAGTATCCTTCAGCACTTACAACTTTTGAGCAAATTACCAACTACGCAAAAGGCAAGAGAATAGCATTGTTTCTGGATTATGATGGAACTCTTTCACCTATTGTGGATAATCCTGACAGTGCTTTCATGTCTGAAAATATGCGTGCTGCTGTTAAAAAAGTGGCAGAACTTTTTCCTACAGCTATAATTAGTGGAAGAAGTCGTGACAAGGTATACGAATTTGTAGGACTAACAGAACTCTATTATGCTGGTAGTCATGGGATGGACATCATTGGTCCTGTCAGACAATCTGTATCTGATAACCATGCTAATTGCATTAGGTCTACTGACAATCAGGGCAAGGAAGTTAATTTATTCCAACCAGCTGCTGAATTCTTACCAATGATTGATGAGGTGTATAACTCTCTTGTTGAATGTACAATTGACATTAAAGGGGCAAAAGTTGAGAACAATAAGTTTTGTGTCTCTGTACACTACCGCAATGTAGACGAGAAGAGTTGGGATACAGTGGGTCAACGAGTTTATGATATTTTGAAGAATTATCCACGCTTGCGATTAACCCATGGGCGAAAGGTTTTAGAGGTCCGACCAGTGATCAATTGGGATAAGGGGAAAGCTGTCACATTTTTACTTGAGTCACTTGGACTTAGCAACTGTGATGATGTGCTCCCTATATATGTTGGGGATGATCGGACTGATGAAGATGCATTTAAGGTTTTGAGAGAGGGAAATAGAGGTTATGGCATCTTAGTGGCCTCTGCACCCAAGGAAAGCAATGCAGTCTACTCTCTTCGTGATCCATTAGAGGTCATGGAATTCCTCAAGTCACTTGTGGTATGGAAGTCAAGCCTCCTTAAAAGCCTCATATAG 1164 0.4124 MDLKSNHTPVLTDAAPITKSRLGVHSSLLPYSPTGAAFPHSLFLTIPRKKTGILEDVRSSGWLDAMKSSSPTAKKITKDINHGFASSDVDSAYCTWLLKYPSALTTFEQITNYAKGKRIALFLDYDGTLSPIVDNPDSAFMSENMRAAVKKVAELFPTAIISGRSRDKVYEFVGLTELYYAGSHGMDIIGPVRQSVSDNHANCIRSTDNQGKEVNLFQPAAEFLPMIDEVYNSLVECTIDIKGAKVENNKFCVSVHYRNVDEKSWDTVGQRVYDILKNYPRLRLTHGRKVLEVRPVINWDKGKAVTFLLESLGLSNCDDVLPIYVGDDRTDEDAFKVLREGNRGYGILVASAPKESNAVYSLRDPLEVMEFLKSLVVWKSSLLKSLI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1864 387 Gene3D - 226 384 IPR023214 -
Bisa12g1864 387 Gene3D - 119 209 IPR023214 -
Bisa12g1864 387 SUPERFAMILY HAD-like 120 378 IPR036412 -
Bisa12g1864 387 CDD HAD_TPP 120 370 - -
Bisa12g1864 387 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 381 IPR044651 GO:0004805|GO:0005992
Bisa12g1864 387 NCBIfam trehalose-phosphatase 116 376 IPR003337 GO:0003824|GO:0005992
Bisa12g1864 387 NCBIfam HAD-IIB family hydrolase 121 339 IPR006379 -
Bisa12g1864 387 FunFam Trehalose 6-phosphate phosphatase 226 385 - -
Bisa12g1864 387 FunFam Trehalose 6-phosphate phosphatase 119 208 - -
Bisa12g1864 387 Pfam Trehalose-phosphatase 122 365 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1864 Bisa-ChrBisa12 40448063 40450679 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1864 113 375 Trehalose Biosynthesis Gene Families AT1G70290 26.855 3.11e-12 66.2