Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1835 ATGGGAGGCCACATGAGAGCTCACTTTGCTAAACTTCCGGTCCCTCCTAAGCCTGCTCCTCCAATAACTCCAAGTCCAGCCCCCGATCAAGCCCCACTGGGAAACTCCCCGGCTGGTGCCGATGGCAGTTCGGTCTCAACCCCGCGTCCTTTGACCCGATCTCCTTCTTCATCGTCTTCAATCGTTGTTAAGAAGAATTCTCCCATTGGACAAAACTTCCGGTCTCTTAATCGGGACTTCTCCACCAGGGCATCGGTGGAAGTGGGAGCGAGCTCGGAGGATGAGATCCCTAATTACGACAGAGACAGCAATTCTGATCAGTCTTACCCTGCTCGCATAAGATCCAAACGCAGCCGCAAATTTAATGAAACAGCCAGGGCGGTGGCAGTGGTTTCATCGCCTAAGACAAAAGCTGATCACAAAAATCAGCCAAGACAAACGAGTTCCATGCTGGATGCTCTTTTTCCTGCTGAAGAAGCTGCAACGTCTCTTGTCATTCTCTCCAAGGACAAGTGGCCAGAAGAGGAAAAATGCGAGATCAAGAAGAAACGGCCACAAATAGAGGAAGAAAAAGAAGAAGAAGACCATCTCTTTCACAATCGCACTCGAACTGGGCGGTTCGAGTGTGAGGTGTGCAAGAAAGAGTTTAGCTCTTATCAGGCACTTAGAGGACACAACTCAATCCATAAGAAGATTAGGAATGTTGCAGAAGATCATCAATCTAACGGAGATCACAGGAAGGTACAATTTGCCAATAATGCTAAGAAATTTCGGGTGGGTTTCATTGATCTTAATTTGCCTGCTCCTGGGGCAGACGAAGAGGTAAGCCAGAATGTGGAGTTTTCAACTCTGTCCAGTGAAGACTGTTGA 870 0.4816 MGGHMRAHFAKLPVPPKPAPPITPSPAPDQAPLGNSPAGADGSSVSTPRPLTRSPSSSSSIVVKKNSPIGQNFRSLNRDFSTRASVEVGASSEDEIPNYDRDSNSDQSYPARIRSKRSRKFNETARAVAVVSSPKTKADHKNQPRQTSSMLDALFPAEEAATSLVILSKDKWPEEEKCEIKKKRPQIEEEKEEEDHLFHNRTRTGRFECEVCKKEFSSYQALRGHNSIHKKIRNVAEDHQSNGDHRKVQFANNAKKFRVGFIDLNLPAPGADEEVSQNVEFSTLSSEDC 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1835 289 MobiDBLite consensus disorder prediction 1 149 - -
Bisa12g1835 289 MobiDBLite consensus disorder prediction 268 289 - -
Bisa12g1835 289 ProSitePatterns Zinc finger C2H2 type domain signature. 209 229 IPR013087 -
Bisa12g1835 289 MobiDBLite consensus disorder prediction 37 88 - -
Bisa12g1835 289 Pfam C2H2-type zinc finger 206 231 - -
Bisa12g1835 289 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 238 IPR044303 GO:0006355
Bisa12g1835 289 ProSiteProfiles Zinc finger C2H2 type domain profile. 207 234 IPR013087 -
Bisa12g1835 289 MobiDBLite consensus disorder prediction 13 31 - -
Bisa12g1835 289 SUPERFAMILY beta-beta-alpha zinc fingers 204 231 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1835 111 276 C2H2 Transcription Factor Family AT3G60580 29.665 7.17e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa12g1835 zf-C2H2_6 6.5e-10 CL0361