Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1834 ATGAAACCTTTGTTTCTCTTTCTCACATTCTCCTTCTTTTCCCAAACATACCTAGTTTTCTCTGCTTCTTCTTCAACTCTGCCCCTCCAACTCATTTCTCTGCTTTCACTGAAATCTTCCTTCATTGACCCTCTCAACATCCTCCATGACTGGGACGCTTCCTCCACCTTCTCAAACTCTAATTTCCAAGACCCTACTTGGTGTTCATGGTCAGGCATCACGTGCCATTCTAAAACAGCTCAAATCACCTCCATTGACCTCTCTCATCGCAACCTTTCAGGCACCATTTCACCTGAGATACGGTACTTGACGAGCTTAGGCCACTTGAATCTAAGTGGAAACGACTTCAGTGGGCCTTTCCAAGCAGCAATTTTTGAACTCACTGACCTGAGGACTCTAGATATCAGCCACAACTCCTTCAACTCAACTTTCCCACCTAAGATTTCGAAGCTCAAGTTCTTGAGGGTCTTCAATGCTTACAGCAACAACTTCGTCGGCCCTTTACCTCAAGAATTCATCAGGCTCAGGTTTCTTGAGCAGTTAAACCTTGGTGGAAGTTACTTCAGCGACAGGATTCCTTCAGGTTATGGCAGTTTCGCAAGATTGAAGTTCCTTTATCTGGCTGGAAATGCGTTGGAAGGTCCAATACCACCTCAGTTAGGCTACTTAACACAGCTAGAACGCTTGGAAATCGGATACAACCAGTTTTCAGGAGGAATACCAGTGGAATTGGCTTCTTTGTCTAGTCTTAAATACTTGGATATCTCTTTTGCTAATCTTTCAGGCTCTTTAATTCCAGAACTGGGAAACTTGACCACACTGGAGACGTTGTTGCTGTTCAGAAATCACTTCACTGGTGAAATCCCATCAAGCTTAGGCAATTTGAAAGTTATCAAGGCTCTTGATTTGTCAGATAACGAACTCACTGGGTCTATTCCTACAGAAGTTACAATGTTGAAGGAACTTAACATTTTGAGCTTAATGGACAACAAGCTGACCGGTGAAATACCTGAAGGCATTGGAGAACTTCCCAACCTCGACACCCTGCATCTATTTAACAATTCTCTTACTGGGATTCTCCCCCAAACGCTTGGCTCAAATGGGTTACTCCAGAGACTAGATGTGTCCACGAATTCACTCACAGGTCCTATCCCCCCAAGTGTTTGCAAAGGAAACAAGCTCATCAAGCTCATCCTCTTCCACAATAAGTTTGATAGTGCACTTCCATCATCACTCCTGAACTGTACCTCATTAACAAGGCTCAGAATCCAAAACAACCATCTCAACGGTTCGATTCCTGCTGGTTTAGGTCTCCTTCCGAACCTGACCTTCGTCGATATTAGCAACAACAGCTTCGTCGGTCCAATTCCTGAAGATTTCGGCAATGCCATCAAGATACAGTACTTGAACATCTCTGGAAACTCCTTTGAAAGCCCATTACCCAGTAACATCTGGAACGCCAGCAATCTCCAGATATTCTCAGCGAGTTCATCGAAAATCATTGGCGAAATCCCAGACTTCATCGGATGCCAGAACATCTACAAAATCGAATTACACGGAAATTCACTCAACGGTAGCATCCCTTGGGACATTGGACACTGCGAGAAGCTCGTTCTACTGAATCTGAGCCGAAATTCCCTCTCCGGCATCATTCCTTGGGAAATCTCTGCTCTTCCAACCATCACCGACGTCGATCTCTCTCACAATTTCCTCACCGGCACAATCCCCGCAAATTTTAACAACTGCACCACACTCGAGAACTTCAACGTCAGTTACAACCTCCTCACCGGGCCAATTCCGTCGTCGGGATCCACCTTCCCGAACCTCCATCCCTCGTCATTCTCCGGCAACGACGGCCTCTGCGGCGGAGTCATCGCAAAGCCGTGCGCGGCCGACGCAGAAGCCGTTGCCGCCGAGAACAATGAAATCGAGCTTCACAACAAGCATCAGCCAAAGCGAACCGCCGGAGCGATCGTATGGATCGTCGCGGCGGCATTCGGGATCGGCCTCTTCGCGCTCGTCGCCGGAACTCGATGCTTCCGAGCAAACTACGGTGGTCAATTCGGCAGCGACGACAGCCGCGACATCGGGCCATGGAAACTGACGGCGTTCCAGCGTTTGAACTTCACAGCGGAGGACGTAATAGAGTGCTTGTCGATGTCCGATAAGATCATAGGGATGGGGTCCACAGGGACGGTATACAAGGCGGAGATGCCAGGTGGCGAGATCGTGGCCGTGAAGAAGCTGTGGGGGAAGCAGAAGGAGAGCAGCAACATCCGACGGCGGAGAGGGGTTCTCGCGGAAGTAGAAGTGTTGGGGAACGTGAGGCACAGGAACATAGTGAGATTGCTAGGGTGCTGCAGCAACAGGGAGTGCACGATGCTGCTGTACGAGTACATGCCCAATGGGAATTTAGACGATTTATTGCATGACAAAAATAAAGGAAATAATAATAATAATCTGGTCGCTGATTGGTTGACGAGGTACAAGATTGCGCTGGGTGTGGCGCAAGGGATTTGCTATCTTCACCATGACTGTGATCCGGTGATCGTGCACCGTGATCTGAAGCCGAGTAACATATTATTGGACGGTGAGATGGAGGCCAGAGTGGCAGATTTTGGAGTGGCGAAGTTAATTCAGAGTGATGAATCTATGTCTGTCATTGCTGGATCATATGGTTACATTGCACCAGAATATGCATATACCCTGCAAGTAGACGAGAAGAGCGACATCTACAGCTACGGGGTGGTGTTGATGGAGCTTCTAAGCAGCAAGCGATCGGTGGAGGCGGAATTCGGGGACGGGAATAGCATTGTAGAGTGGGTGAAGAGTAAGATGAAGAGCAAGGAGGGGATGGATGAGATATTAGACAAGAACGTGGGAGGGCAGTGCAGGTGGGTGAGGGAGGAGATGCTTCAGATGCTTAGGATTGCATTGCTCTGCACCAGTTCAAACCCTGCGGACCGCCCTTCCATGAGGGACGTCATGTTGATGCTCCAGGAGGCCAGGCCCAAACGAAAAGGGCTCGATGCAGCCATAAGCGCTCTTGTTGGTGTTGGTGTTGGTGCAGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTCACAACAAGCCTTCAGCGTGCCACACTTTTTCCGGAAAATTAACCTAG 3147 0.4878 MKPLFLFLTFSFFSQTYLVFSASSSTLPLQLISLLSLKSSFIDPLNILHDWDASSTFSNSNFQDPTWCSWSGITCHSKTAQITSIDLSHRNLSGTISPEIRYLTSLGHLNLSGNDFSGPFQAAIFELTDLRTLDISHNSFNSTFPPKISKLKFLRVFNAYSNNFVGPLPQEFIRLRFLEQLNLGGSYFSDRIPSGYGSFARLKFLYLAGNALEGPIPPQLGYLTQLERLEIGYNQFSGGIPVELASLSSLKYLDISFANLSGSLIPELGNLTTLETLLLFRNHFTGEIPSSLGNLKVIKALDLSDNELTGSIPTEVTMLKELNILSLMDNKLTGEIPEGIGELPNLDTLHLFNNSLTGILPQTLGSNGLLQRLDVSTNSLTGPIPPSVCKGNKLIKLILFHNKFDSALPSSLLNCTSLTRLRIQNNHLNGSIPAGLGLLPNLTFVDISNNSFVGPIPEDFGNAIKIQYLNISGNSFESPLPSNIWNASNLQIFSASSSKIIGEIPDFIGCQNIYKIELHGNSLNGSIPWDIGHCEKLVLLNLSRNSLSGIIPWEISALPTITDVDLSHNFLTGTIPANFNNCTTLENFNVSYNLLTGPIPSSGSTFPNLHPSSFSGNDGLCGGVIAKPCAADAEAVAAENNEIELHNKHQPKRTAGAIVWIVAAAFGIGLFALVAGTRCFRANYGGQFGSDDSRDIGPWKLTAFQRLNFTAEDVIECLSMSDKIIGMGSTGTVYKAEMPGGEIVAVKKLWGKQKESSNIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHDKNKGNNNNNLVADWLTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMELLSSKRSVEAEFGDGNSIVEWVKSKMKSKEGMDEILDKNVGGQCRWVREEMLQMLRIALLCTSSNPADRPSMRDVMLMLQEARPKRKGLDAAISALVGVGVGAGAGAGAGAGAHNKPSACHTFSGKLT 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1834 1048 ProSiteProfiles Protein kinase domain profile. 719 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1834 1048 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 689 799 - -
Bisa12g1834 1048 ProSitePatterns Protein kinases ATP-binding region signature. 725 748 IPR017441 GO:0005524
Bisa12g1834 1048 Gene3D Ribonuclease Inhibitor 321 637 IPR032675 -
Bisa12g1834 1048 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 259 1000 - -
Bisa12g1834 1048 ProSitePatterns Serine/Threonine protein kinases active-site signature. 850 862 IPR008271 GO:0004672|GO:0006468
Bisa12g1834 1048 SMART LRR_typ_2 127 151 IPR003591 -
Bisa12g1834 1048 SMART LRR_typ_2 271 295 IPR003591 -
Bisa12g1834 1048 SMART LRR_typ_2 199 223 IPR003591 -
Bisa12g1834 1048 SMART LRR_typ_2 343 366 IPR003591 -
Bisa12g1834 1048 SMART LRR_typ_2 439 462 IPR003591 -
Bisa12g1834 1048 SUPERFAMILY Protein kinase-like (PK-like) 722 999 IPR011009 -
Bisa12g1834 1048 FunFam Leucine-rich repeat receptor-like protein kinase TDR 316 631 - -
Bisa12g1834 1048 SUPERFAMILY RNI-like 84 429 - -
Bisa12g1834 1048 Gene3D Phosphorylase Kinase; domain 1 700 799 - -
Bisa12g1834 1048 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 217 312 - -
Bisa12g1834 1048 Gene3D Ribonuclease Inhibitor 263 320 IPR032675 -
Bisa12g1834 1048 Gene3D Ribonuclease Inhibitor 31 157 IPR032675 -
Bisa12g1834 1048 SMART serkin_6 719 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1834 1048 Pfam Leucine Rich Repeat 536 558 IPR001611 GO:0005515
Bisa12g1834 1048 SUPERFAMILY L domain-like 370 622 - -
Bisa12g1834 1048 Pfam Protein kinase domain 722 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1834 1048 Gene3D Transferase(Phosphotransferase) domain 1 800 1014 - -
Bisa12g1834 1048 FunFam leucine-rich repeat receptor-like protein kinase TDR 800 1011 - -
Bisa12g1834 1048 Gene3D Ribonuclease Inhibitor 161 262 IPR032675 -
Bisa12g1834 1048 FunFam Leucine-rich repeat receptor-like protein kinase 30 192 - -
Bisa12g1834 1048 Pfam Leucine rich repeat N-terminal domain 30 75 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1834 Bisa-ChrBisa12 39525228 39529751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1834 6 1009 Receptor kinase-like Gene Family AT1G08590 42.647 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa12g1834 Pkinase 1.8e-47 CL0016