Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1831 ATGTACATCAAAGAGATTTGCTTGGAAGGTTTCAAATCGTATGCTACCAGAACTGTTGTTCCGGGTTTCGATCCATACTTCAATGCCATTACGGGGTTGAACGGTTCCGGCAAGTCAAACATACTTGATTCGATTTGCTTTGTTCTGGGTATCACGAATTTGCAGCAGGTTCGGGCTTCAAACCTTCAGGAGCTCGTATATAAGCAAGGGCAGGCGGGGATTACTAAAGCTACAGTGTCGGTTGTCTTTGATAATACGGATAGGAGTCGGAGCCCTCTTGGGTATGAGGACCATCCTGAGATTACAGTGACAAGACAGATTGTGGTTGGAGGGAGGAACAAATATTTGATCAATGGGAAACTTGCCCAGCCTAGTCAAGTTCAAAATCTTTTCCATTCGGTGCAGCTAAATGTTAATAATCCACATTTTCTCATAATGCAAGGGCGCATCACCAAGGTTTTAAATATGAAACCGCCAGAGATATTATCAATGCTTGAGGAAGCTGCTGGGACAAGAATGTATGAGACGAAGAAAGAGGCTGCTCTGAAAACACTTGAGAAGAAGCAGAATAAGGTTGACGAGATTAATAAACTTCTTGATGAGGAGATACTACCTGCTCTAGAGAAGTTAAGGAAAGAAAGGATGCAGTACATGCAGTGGGCTAATGGCAATGCAGAGTTAGATAAGCTGAGAAGGTTTTGCATTGCTTATGAGTATGTTCAAGCAGAGAGGATTAGAGACAATGCAGTGTCTGAGGTGGAAAAAGTAAACGCCAAAATTGCTGAGATTGATGACTGTACTAAGACGACACAGTTGGAAGTACAGGAAATGGAGACTAAAATAGCAAGGCTGACTGCTGAAAAGGAAGAACGCATGGGTGGAGAAGTGAAATCTTTATCAGACAAGGTTGATGCACATGCACAGAATCTTGTGAAGGAAACATCTGTACTAAATAATAAAGAGGACACTCTGAGAAGTGAAAAAGCCAATGAACAAAATATCATTAATAATGTTGAAGAATTGAAGAAATCAGTTGAAGAGAAGACCTTAGCTGTAAAAAAGGCTGAAGAAGGAGCTGTTGATCTGAAAAGGAGAGTTGATGAGCTTTCTAAGAGTCTGGAGGATCATGAAAAGGAATACCAGGGTGTATTAGCTGGGAAGAGCAGTGGAAATGAAGAGAAATGCTTGGAGGATCAGCTAGCTGATGCAAAAATAGCAGTTGGGAGTGCTGAAACAGAATTGAAACAGCTGAAAACCAAAATTAGCCATTGTGAAAAGGAACTAAAAGAGAAAACACATCAATTAAAATCAAAACGGGAAGAAGCTACTGCCGTAGAAAATGAGCTCAGCACTAGGAGGAAAGATGTGGAGAATGTCAAGATGGAATTGGAGTCTCTTCCTTATAAAGATGGTGAGATGGAATCTTTGCAAAAGGAGCGTGCATCTGAGATGGAGTGGGTGCAAAAGTGGAAGGATGAAATACGCAATCTTTCAGCACAATTAACAAATGTTGAATTTACATACCGTGATCCAGTCAAGAATTTTGATAGGTCAAAGGTGAAAGGCGTCGTTGCGAGGCTCATCAAAGTAAAGGATAGGGCAACAATGACTGCCCTAGAGGTTACTGCTGGTGGAAAGTTGTACAATGTTGTGGTTGACACAGAAAGTACTGGAAAACAACTACTACAGAACGGTGATTTAAGAAGAAGAGTTACTATTATACCTTTAAACAAAATACAATCCCATACTGTTCCCCCTAGAATTCAACAAGCTGCTGCTAGTTTGGTTGGTGAGGAGAATGCTGAACTGGCACTTTCTTTGGTTGGTTATGAGGAAGAATTGAAGAGTGCTATGGAATATGTATTTGGTTCCACCTTTGTTTGCAAAAATACTGATGCCGCAAAGGAGGTAGCGTTTAATCGGGAGATTCACACCCCAAGTGTCACTCTTGAAGGAGATATATTTCAGCCAAGTGGTCTTCTAACTGGTGGAAGTCGGAAGGGTGGTGGCCAACTCTTAAGGCAACTTCATGATTTAGCAGAGGCTGAGTCAGAACTTTCAATACATCAACAAAGGTTGTCTGAGGTTGAGGCAAAGATTAAAAAGCTCCTTCCTCTTCAGAAGAAATGGCAGGACCTCAAAACGCAGTTAGAACTTAAGTCATATGATCTTTCATTGTTTCAAAGTAGAGCTGAGCAAAATGAGCACCATAAGCTTGGGGAACTAGTCAAGAAGATTGAGCAAGAGCTTGCAGAAGCAAAATCTGCAGTGAAGGAAAAGCAATTTGCTTATGAAAACTGTGTCAAGACTGTTTCATCACTTGAGAAATCAATTAAAGAGCATGATAATAATCGTGAGAGTAGGCTAAAAGGCTTGGAGAAGAAGATAAAGTCAATCAAATCCCAAATGCAGTCATCTTTAAAAGATCTCAAGGGACATGATAATGATAAGGAGAGGCTTGTAATGGAAATGGAAGCTGTTATTCAGGAGCGTATATCCTTGGAGAAGCAATTAGATTCTTTGAGGACACAGATTAATAATCTTGACTCAGAAGTAGAAGAACAAAAAATCAGGGTTGCTGCTGCAAGGAATAATCATGATCAGGTGTTGTCAGATCTGAATTCAGTTCGCCTAAAAATGAAGGAATGTGATAAGGAAATTAGTAGTATTATGAAGGAACATCAAAAACTTGAACATAAACTTAGTGAGAATAACCTTGAAAGGAAGAGAATGCAGAATGAGGTAAAACGGATGGAGATGGAACAAAAAGACTGTTCTGTCAGGGTGGATAAATTGTTAGAGAAACATGCATGGATTGCTTCTGAAAAACAGCTATTTGGTAAAAGTGGGACTGATTATGATTTTTCCTCCCATGATCCTTGTAAAGCAAGGGAAGAATTTGAGAATCTTCAAGCTGAACAATCTGGGCTTGAGAAAAGGGTGAACAAGAAAGTAATGGCGATGTTTGAGAAGGCAGAAGATGAGTATAATGATTTGATGTCTAAGAAAAACATAATTGAGAATGACAAGTCTAAAATCAAGAAGGTGATTGAAGAGCTAGATGAGAAGAAGAAGGAAACACTAAATGTTACCTGGATAAAAGTTAACAATGACTTCGGATCCATCTTTTCTACTTTGCTACCTGGCACAATGGCTAAGTTAGAACCTCCCGAAGGTTGTAGTTTTCTTGATGGTCTTGAAGTTCGTGTTGCATTTGGAAGCGTGTGGAAACAATCCTTGTCAGAACTGAGTGGTGGTCAACGATCACTGCTTGCACTTTCTCTGATTCTGGCACTTCTTCTGTTCAAACCTGCTCCACTCTACATCCTTGATGAGGTTGATGCGGCTCTTGATTTAAGCCACACACAAAACATCGGAAGAATGATAAAGGCTCACTTTCCACATTCCCAGTTTATTGTGGTTTCACTGAAGGAAGGCATGTTCAATAATGCAAATGTTCTTTTCCGGACAAAATTTGTGGATGGTGTCTCAACTGTTCAGCGAACTGCTGCAGCTAAGCAGAGCAAGTGA 3531 0.4027 MYIKEICLEGFKSYATRTVVPGFDPYFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSVVFDNTDRSRSPLGYEDHPEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEAALKTLEKKQNKVDEINKLLDEEILPALEKLRKERMQYMQWANGNAELDKLRRFCIAYEYVQAERIRDNAVSEVEKVNAKIAEIDDCTKTTQLEVQEMETKIARLTAEKEERMGGEVKSLSDKVDAHAQNLVKETSVLNNKEDTLRSEKANEQNIINNVEELKKSVEEKTLAVKKAEEGAVDLKRRVDELSKSLEDHEKEYQGVLAGKSSGNEEKCLEDQLADAKIAVGSAETELKQLKTKISHCEKELKEKTHQLKSKREEATAVENELSTRRKDVENVKMELESLPYKDGEMESLQKERASEMEWVQKWKDEIRNLSAQLTNVEFTYRDPVKNFDRSKVKGVVARLIKVKDRATMTALEVTAGGKLYNVVVDTESTGKQLLQNGDLRRRVTIIPLNKIQSHTVPPRIQQAAASLVGEENAELALSLVGYEEELKSAMEYVFGSTFVCKNTDAAKEVAFNREIHTPSVTLEGDIFQPSGLLTGGSRKGGGQLLRQLHDLAEAESELSIHQQRLSEVEAKIKKLLPLQKKWQDLKTQLELKSYDLSLFQSRAEQNEHHKLGELVKKIEQELAEAKSAVKEKQFAYENCVKTVSSLEKSIKEHDNNRESRLKGLEKKIKSIKSQMQSSLKDLKGHDNDKERLVMEMEAVIQERISLEKQLDSLRTQINNLDSEVEEQKIRVAAARNNHDQVLSDLNSVRLKMKECDKEISSIMKEHQKLEHKLSENNLERKRMQNEVKRMEMEQKDCSVRVDKLLEKHAWIASEKQLFGKSGTDYDFSSHDPCKAREEFENLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLNVTWIKVNNDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTAAAKQSK 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1831 1176 Coils Coil 736 763 - -
Bisa12g1831 1176 Coils Coil 487 507 - -
Bisa12g1831 1176 Coils Coil 400 448 - -
Bisa12g1831 1176 Pfam SMC proteins Flexible Hinge Domain 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bisa12g1831 1176 Coils Coil 982 1026 - -
Bisa12g1831 1176 Coils Coil 324 379 - -
Bisa12g1831 1176 Coils Coil 239 259 - -
Bisa12g1831 1176 Gene3D - 426 589 - -
Bisa12g1831 1176 FunFam Structural maintenance of chromosomes 2 995 1174 - -
Bisa12g1831 1176 SUPERFAMILY Tropomyosin 680 893 - -
Bisa12g1831 1176 Gene3D - 994 1176 IPR027417 -
Bisa12g1831 1176 CDD ABC_SMC2_euk 1 156 IPR027120 GO:0005524|GO:0016887
Bisa12g1831 1176 FunFam Structural maintenance of chromosomes 2 1 202 - -
Bisa12g1831 1176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 1157 IPR027417 -
Bisa12g1831 1176 MobiDBLite consensus disorder prediction 430 449 - -
Bisa12g1831 1176 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 1 1173 - -
Bisa12g1831 1176 PIRSF SMC 1 1156 IPR024704 GO:0005524|GO:0016887
Bisa12g1831 1176 SUPERFAMILY Smc hinge domain 481 686 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bisa12g1831 1176 Coils Coil 789 809 - -
Bisa12g1831 1176 Coils Coil 267 287 - -
Bisa12g1831 1176 Coils Coil 817 865 - -
Bisa12g1831 1176 SMART SMC_hinge_2 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bisa12g1831 1176 Coils Coil 178 202 - -
Bisa12g1831 1176 Gene3D - 1 202 IPR027417 -
Bisa12g1831 1176 Gene3D - 590 666 - -
Bisa12g1831 1176 Coils Coil 880 923 - -
Bisa12g1831 1176 FunFam Structural maintenance of chromosomes 2 518 583 - -
Bisa12g1831 1176 Pfam RecF/RecN/SMC N terminal domain 2 1161 IPR003395 -
Bisa12g1831 1176 Coils Coil 679 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1831 Bisa-ChrBisa12 39256606 39275641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1831 3 170 Structural Maintenance of Chromosomes family AT5G15920 23.214 2.20e-07 53.5