Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1830 ATGGGTCCATCCTCAGTGGCTTCCCGCTTTCAAGGGGTGACACGACAAGCATTTCGATCCTATGTTGCAGAGTTCATCTCCACTTTCTTCTATGTCTTTGCTGTTGTTGGCTCTTCCATGGCTTCTAGGAAGTTGACGCCTAAGGCTGCGATGGATGTGTCAAGTCTGGTGGTGGCAGCGATTGCAAATGCCTTTGCTCTGTCGTCGGTGGTGTTCATGGCGTCGGACGTCTCCGGCGGCCACGTGAACCCGGCGGTGACCTTCGGAAGGGTCGTCGGAGGCCACATCCGCGTGTGGGCTGCTCTCTTTTACTGGATCGCTCAGATGATAGCCTCCCTCATGGCTTGCCTCGTCCTCAAGATCACCGTCGTCGGAATGCACGTGCCAACATACAGTATAGCAGCAGAAATGACAGGGTTTGGCGCAGCCATATTAGAGGGAGTCGTAACCTTTGGTTTGGTGTACACTGTGTATGCTGCAAGGGACCCTAGGCGCAGTAGCGGTCCGCTAGGCGCCCTGGCGATCGGAGCGGTAGCCGGAGCGGGCGTGCTAGCGGTGGGTCCATTCTCGGGCGGGGCAATGAACCCGGCTTGTGCCTTCGGGTCAGCTGCCATTGCAGGAAGCTTCAAGAACCAAGCAGTGTACTGGGTTGGACCCTTGATTGGGGGTGCCATTGCTGGCCTTGTGTATGACCATGTGGGGTACCCTTCTCAGCCTGCAGATTCCATTGAAGGCGTTGGAGAAGGAGATAGAGTTTGA 759 0.5639 MGPSSVASRFQGVTRQAFRSYVAEFISTFFYVFAVVGSSMASRKLTPKAAMDVSSLVVAAIANAFALSSVVFMASDVSGGHVNPAVTFGRVVGGHIRVWAALFYWIAQMIASLMACLVLKITVVGMHVPTYSIAAEMTGFGAAILEGVVTFGLVYTVYAARDPRRSSGPLGALAIGAVAGAGVLAVGPFSGGAMNPACAFGSAAIAGSFKNQAVYWVGPLIGGAIAGLVYDHVGYPSQPADSIEGVGEGDRV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1830 252 Gene3D Glycerol uptake facilitator protein. 6 242 IPR023271 -
Bisa12g1830 252 Pfam Major intrinsic protein 16 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa12g1830 252 SUPERFAMILY Aquaporin-like 14 238 IPR023271 -
Bisa12g1830 252 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Bisa12g1830 252 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa12g1830 252 PRINTS Major intrinsic protein family signature 213 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa12g1830 252 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa12g1830 252 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa12g1830 252 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa12g1830 252 PRINTS Major intrinsic protein family signature 176 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa12g1830 252 FunFam Probable aquaporin TIP5-1 4 242 - -
Bisa12g1830 252 PANTHER AQUAPORIN-8 14 233 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1830 Bisa-ChrBisa12 39249943 39252402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1830 1 252 Major Intrinsic Protein MIP AT3G47440 62.016 1.74e-98 286