Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1828 ATGGTCTCTCCAATTTGTCTTTTCTCCATCAATCACATTATTAAATCCCGGCGTGCTTATAAAACGTATTATGGCCACTCGAGGTTCCGCTGCAAGTCTGCAACTATTGTGAGTTTCAGTAAAAAAGCTGTCCCTAATATGGCTAATCCACCCACTATCGCCGCCGTGACATTCCTCTTACTCTCATTCCTCTTCACTATCCGCGTCACCTCCTACACTCCTAGTGAACACTACGCAGTCAATTGCGGCTCCTACGGCGAATTTTCTACTCCAGACAACCGGACATGGGAAGGAGACATCCGCTCCAAACTATTCTCTCTCATTGAATCCCAACCGGGCCGCCCCTCTGTCATTGTCAACGCATCGACCAACGCAGCTCTAAACCACCCCTACAAGACTGCACGCCTCTCTCGCTCCGAATTCACCTACTCATTCCCCGTCAACATTGGCCAAAAGTTCATTCGCCTCTTCTTTTTCCCATCTTCCTACGACGGCGGGTTCAACCGCTATGACTCCCTCTTCTCTGTCAAAGTAGGAAACCATACCCTTCTATACAACTTCAACCCTTCACTTTTTTCAGACTACATTCACGAAGATACCTTCTTCAGAGAGTACTGTGTGAACGTCGAACCGGGTCAGCGGCTAAACGTGACCTTCACGCCTAGCCGATCGCATCCCGATGCCTACGCTTTCGTCAACGGAATCGAGGTCATCTCCATGCCCACTTATCTATATTACACCAGCTCAGATGATCAAGAATCGATGCAGCTAAACGGTGAAAACCAACAGTTTCCGGTGACAACCAGCATGGCCCTCGAGACAGCATACAGAATCAGCGTTGCCGGTAGTCAAATCCCTGCTGAAAGAGACACCGGCATGTTCCGATCTTGGGACAATGATGATCAGTACGTGGAGGCGAAGCACCAAAAAAGCGAATCCTCAGGTTTTGGTTTAACTATAAAGTATAAAGATGGTCTGGACTATATTGCACCGGAAGAAGTATACAAGCATGCCCGAAGCTACGGGATGAACGAGACGTCCAAATATAATGTGACTTGGAACTTCGAAGTGGACCCAGAGTTTACTTACATGATGAGACTGCATTTTTGTGAGTTTGATCAACAGGTTCAATTTGCTGGACAAAGAGTTTTTCAGATCTTCATAGCTGATACTTTGGTTGAGGGTTACGCCGATGTGATCATTTGGAGTGGCGGCAATCTGGTTCCTGTTCATAGGGACTACGCTGTGAAGATGGAAGATAGAAGCTTGAAGAATCTTTCAATTAAGTTACGACCACACCCAAATCCAAAAGTAAGCAATTCCGATGATGTCATTTTGAATGGTATTGAAATTTTCAAAATAAGTGACGTCGCCAATGGCAGTCTCGCAAGTCCGAATCCCGACCCACGTCTAATTCCAAACTCACCGCCATTTATGATGCCATCTAAGAACTCGAAGAAAACAAGATTTATAATTTTCATTGTTGTGGGTGTAGCTTCAGGCTTCGTTGTGCTGTCTCTCATTGTTTTCCTAATTTTCCGGCGATTGACTAGAGGTCCAGTCAACGAAGGAAGTTCGCGGTGGGGACAGAAATCTGTAGCTATGTCCAAGTCAAGCAAGACCCATCGGACATCACTGCCTTCTGATTTGTGTCGTTGCTTTTCAATCGCTGAGATAAAGGCAGCCACTAATAATTTCGATGATATTTTCATAGTGGGAGTGGGGGGGTTTGGTAATGTGTATAAAGGCTACATTGATGATGGTACGGTTCCTGTGGCAATCAAACGGCTCAAACAAGGGTCGCAACAAGGGGCCCATGAGTTCCAGACTGAGATTGAAATGCTCTCTCAACTTCGTCACCTTCATTTAGTGTCTCTAATTGGTTACTGCAACGACGGCAACGAGATGATTCTTGTCTATGAATTCATGGCACGCGGGACTCTCAGTGACCATCTTTACAACTCCGAGAACCAACCATTTTCTTGGAAGAAACGGTTAGAGATGTGCCTTGGTGCAGCGCGTGGGCTGAATTATCTTCATACAGGTGCGAACCACAGTATCATTCACCGTGATGTGAAGACCACAAACATTTTAGTGGATGAAAAATGGGTGGCCAAAGTTTCAGATTTCGGATTATCCAAGATAGGACCCATGGGAATGTCAAGGTCTCACATCAGCACAGTAGTAAAAGGAAGTCTCGGGTATGTGGATCCAGAATACTACAAGCGCCAACGATTGACTCACAAGTCTGATGTGTACTCATTTGGAGTGGTGCTACTGGAGGTATTATGTGGGAGACCACCTTTGCTACGTACAGTAGAGAAGCAGAAGGCAAGTTTGGTGGGCTGGGTCCGAAAATGTCATCACGAGGGTGTGGTTCATCAGACCGTTGATCCGGTTTTGATAGAAAGTATCACGTCGGAGTGCTTAAAATCTTTCAGTGACATGGCACTGAAATGTTTGGAAGATGATTCGAATGAACGGCCATCGATGAGTGATGTGGTGTGGGGCTTGGAGTTTGCATTAGAGCTACAAGAGAGCGCAGAGAAAACTGAACTCGATAGAACCCAAATGAAGGAAAAAAGCGAGGAAATAGGGATGTTGGTGAAACGAAGGGAGGAGGAAGAAAGTGAAGCAGTGTTCACAAGTAGTGATGCTACAAGGAGTGAATCCAAGAGTAGCAAGGTGACCACATCTAGCAGTGAGGAGCATAGTTTGGTTTCTGGGATCATCTTTTCCGAATTGAATAATCCAACGCTACGATGA 2766 0.4581 MVSPICLFSINHIIKSRRAYKTYYGHSRFRCKSATIVSFSKKAVPNMANPPTIAAVTFLLLSFLFTIRVTSYTPSEHYAVNCGSYGEFSTPDNRTWEGDIRSKLFSLIESQPGRPSVIVNASTNAALNHPYKTARLSRSEFTYSFPVNIGQKFIRLFFFPSSYDGGFNRYDSLFSVKVGNHTLLYNFNPSLFSDYIHEDTFFREYCVNVEPGQRLNVTFTPSRSHPDAYAFVNGIEVISMPTYLYYTSSDDQESMQLNGENQQFPVTTSMALETAYRISVAGSQIPAERDTGMFRSWDNDDQYVEAKHQKSESSGFGLTIKYKDGLDYIAPEEVYKHARSYGMNETSKYNVTWNFEVDPEFTYMMRLHFCEFDQQVQFAGQRVFQIFIADTLVEGYADVIIWSGGNLVPVHRDYAVKMEDRSLKNLSIKLRPHPNPKVSNSDDVILNGIEIFKISDVANGSLASPNPDPRLIPNSPPFMMPSKNSKKTRFIIFIVVGVASGFVVLSLIVFLIFRRLTRGPVNEGSSRWGQKSVAMSKSSKTHRTSLPSDLCRCFSIAEIKAATNNFDDIFIVGVGGFGNVYKGYIDDGTVPVAIKRLKQGSQQGAHEFQTEIEMLSQLRHLHLVSLIGYCNDGNEMILVYEFMARGTLSDHLYNSENQPFSWKKRLEMCLGAARGLNYLHTGANHSIIHRDVKTTNILVDEKWVAKVSDFGLSKIGPMGMSRSHISTVVKGSLGYVDPEYYKRQRLTHKSDVYSFGVVLLEVLCGRPPLLRTVEKQKASLVGWVRKCHHEGVVHQTVDPVLIESITSECLKSFSDMALKCLEDDSNERPSMSDVVWGLEFALELQESAEKTELDRTQMKEKSEEIGMLVKRREEEESEAVFTSSDATRSESKSSKVTTSSSEEHSLVSGIIFSELNNPTLR 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1828 921 FunFam Receptor-like protein kinase FERONIA 643 861 - -
Bisa12g1828 921 Gene3D Phosphorylase Kinase; domain 1 526 642 - -
Bisa12g1828 921 FunFam Receptor-like protein kinase FERONIA 538 642 - -
Bisa12g1828 921 CDD STKc_IRAK 572 835 - -
Bisa12g1828 921 PANTHER OS03G0124300 PROTEIN-RELATED 56 531 IPR046957 GO:0004672
Bisa12g1828 921 MobiDBLite consensus disorder prediction 866 908 - -
Bisa12g1828 921 SMART serkin_6 566 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1828 921 Pfam Protein tyrosine and serine/threonine kinase 572 835 IPR001245 GO:0004672|GO:0006468
Bisa12g1828 921 FunFam FERONIA receptor-like kinase 77 241 - -
Bisa12g1828 921 Coils Coil 841 878 - -
Bisa12g1828 921 MobiDBLite consensus disorder prediction 882 908 - -
Bisa12g1828 921 Gene3D - 270 455 - -
Bisa12g1828 921 Gene3D - 76 241 - -
Bisa12g1828 921 ProSiteProfiles Protein kinase domain profile. 566 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1828 921 FunFam FERONIA receptor-like kinase 270 455 - -
Bisa12g1828 921 ProSitePatterns Protein kinases ATP-binding region signature. 572 595 IPR017441 GO:0005524
Bisa12g1828 921 Gene3D Transferase(Phosphotransferase) domain 1 643 867 - -
Bisa12g1828 921 SUPERFAMILY Protein kinase-like (PK-like) 551 836 IPR011009 -
Bisa12g1828 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 687 699 IPR008271 GO:0004672|GO:0006468
Bisa12g1828 921 CDD TM_EGFR-like 487 515 - -
Bisa12g1828 921 Pfam Malectin-like domain 80 454 IPR024788 -
Bisa12g1828 921 MobiDBLite consensus disorder prediction 866 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1828 Bisa-ChrBisa12 39135805 39138835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1828 67 921 Receptor kinase-like Gene Family AT3G51550 46.016 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bisa12g1828 Malectin_like 3.6e-41 CL0202