Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1827 ATGGCTAACTCACCCACTATCGCCGTGACCTTCCTCTTACTCTCATTCCTCTTCTCTATCCGCGTCACCTCCTACGCTCCTAGTGAACACTACGCAGTCAACTGCGGCTTCTCCGGCGAATCTTCTACTCCAGACAACCGGACATGGGCCGGAGACGTCGGCTCCAAACTATTCTCTCCCATTGAATCCCAACCCGGCCGCCCCTCCGTCATTGCCGACGCACCGACCTATCCTGCCCAAGACCCCCCCTACAAGACCGCACGCCTCTCTCGCTCCGAATTCACCTACTCATTCCCTGTTCGCAAAGGCCAAAAGTTCATCCGCCTCTTCTTTTTTCCATCTTCCTACGACGGCGGATTCAACCGCTCCGACTCCCTCTTCTCCGTCAAAGTAGGAAACCATACCCTTCTATACAACTTCAACGCTTCACTTGTTTCAGACTACATTCAGGAAAAAACCTTCTTCAGAGAGTACTGTGTGAACGTCGAACCGGGTCAGCGGCTAAACGTGACCTTCACGCCCAGCCGATCGCATCCCGATGCTTACGCTTTCATCAACGGAGTCGAGGTCGTCTCCATGCCCACTTATCTATATTACACCAACCCAGATGATCTAGAATCGATGCAGCTAAACGGTGAAAACCAACAGTTTCCGGTGAGACCCAGCATGGCTCTCGAGACACCATACAGAATCAACGTTGCCGGTAGCCAAATCTCTCCTGAAAAAGACACCGGCATGTTCCGGTATTGGGACGATGATAATCAGTACGTGGAGGCCAAGAAGCCGGCAAGCGAATCCTCAGGTTTTGGTTTAACAATAAAGTATGATAAAGATAGTCAGAACTATTTTGCACCGGACGATGTATACAAGACTGCCCGAAGCTACGGGATGAACGAGAAGTCCAAATATAATGTGACTTGGAACTTCGAAGTGGACCCAGAGTTTGATTACATGGTGAGACTGCATTTTTGTGAGTTTGAGCAAGAGATTCAACTTGTTGGACAAAGAGTTTTTCAGATCTTCATAGCTGATACTTTGGTTGAGAGTCACGCCGATGTGATCATGTGGAGTGGCGGCAATCTGATTCCTGTCCATAGGGACTACGCTGTGGGGATGCGCATGGGAGAAGGAAGCTTGAAGAAAATGAATCTTTCAATTAAGTTACGACCACACCCAAATCCAAAAGTAAGCAATTCCGATGATGTCATTTTGAATGGTATTGAAATTTTGAAAATAAGTAACGTCGCCAATGGCAGTCTCGCGAGTCCGAATCCCGACCCGCGTCTAATTCCAAACTCACCGCCATTTATGATGCCATCTAAGAACTCAAAGAAAATAAGATTTAGAATTTTCATTGTTGTGGGTGTAGCTTCAGGCTTCGCCATGGTATCTCTCATCGTTTTCCTAATTTTCCGGCGATTGACTAGAGGTCCAGTCAACGAAGGAAGTTCGCGGTGGGGACAGAAATCTTTAGCTATGTCCAAGTCAAGCAAGACCCAGCGGACATCACTGCCTTCTGATTTGTGTCGTTGCTTTTCAATCGCTGAGATAAAGGCAGCCACTAATAATTTCGATGATATTTTCATAGTGGGTGTGGGAGGGTTTGGTAATGTGTATAAAGGCTACATTGATGATGGTATGGTTCCTGTGGCAATCAAACGGCTCAAACAAGGGTCGCAACAAGGGGCCCACGAGTTCCAGACTGAGATTGAAATGCTCTCTCAACTTCGTCACCTCCATTTAGTGTCTCTAATTGGTTACTGCAACGATGGCAACGAGATGATTCTTGTCTATGAATTCATGGCACGTGGGACTCTCAGTGATCATCTTTACAACTCCGAGAACCAACCATTTCCTTGGAGGAAACGGTTAGAGATGTGCCTTGGTGCAGCACGAGGGTTGAACTATCTCCATACGGGTGCAAACCACAACGTCATTCACCGTGATGTGAAGACGACAAACATTTTAGTGGATGAAAAATGGGTGGCCAAAGTTTCAGATTTCGGATTATCCAAGATAGGGCCCTTGGGGATGTCAAGGTCTCACATCAGCACAGTAGTGAAAGGAAGTCTCGGGTATGTGGATCCGGAATACTACAAGCGCCAACGACTAACTCACAAGTCTGATGTGTATTCATTTGGAGTGGTGCTACTGGAGGTATTGTGTGGGAGACCACCTTTGCTACGCAATGTAGAGAAGCAAAAGGCTAGTTTGGTGGGGTGGGTTCGGAAATGTTATCACGAGGGTGTGATTCATCAGACCGTTGATCCGTTTCTGATAGAAAGTATCACGCCAAAGTGTTTAAAAACTTTCAGTGACATGGCACTGAAATGTTTGGCAGATGATGCAAATGAACGGCCATCAATGAGTGACGTGGTGTGGGTCTTGGAGTTTGCGTTACAGCTACAAGAGAGCGAAGAGAAAACTGAACTCGGGTGGACCCAAATGAAGGAAAATAGCGGGGAAATAGGGCTGTTATGGAAAGGAATGGAGGAGGAAGAAAGTGAAGCAGGGTTCACGAGCAGTGATGTGAGAAGGAGTGAATCCAAGAATAGCAAGGTGACCACATCTAGCAGTGAAGAGCAGAGTTTGGTTTCTGGGATCATCTTCTCCGAACTAAATAATCCAACGCTACGATGA 2640 0.4708 MANSPTIAVTFLLLSFLFSIRVTSYAPSEHYAVNCGFSGESSTPDNRTWAGDVGSKLFSPIESQPGRPSVIADAPTYPAQDPPYKTARLSRSEFTYSFPVRKGQKFIRLFFFPSSYDGGFNRSDSLFSVKVGNHTLLYNFNASLVSDYIQEKTFFREYCVNVEPGQRLNVTFTPSRSHPDAYAFINGVEVVSMPTYLYYTNPDDLESMQLNGENQQFPVRPSMALETPYRINVAGSQISPEKDTGMFRYWDDDNQYVEAKKPASESSGFGLTIKYDKDSQNYFAPDDVYKTARSYGMNEKSKYNVTWNFEVDPEFDYMVRLHFCEFEQEIQLVGQRVFQIFIADTLVESHADVIMWSGGNLIPVHRDYAVGMRMGEGSLKKMNLSIKLRPHPNPKVSNSDDVILNGIEILKISNVANGSLASPNPDPRLIPNSPPFMMPSKNSKKIRFRIFIVVGVASGFAMVSLIVFLIFRRLTRGPVNEGSSRWGQKSLAMSKSSKTQRTSLPSDLCRCFSIAEIKAATNNFDDIFIVGVGGFGNVYKGYIDDGMVPVAIKRLKQGSQQGAHEFQTEIEMLSQLRHLHLVSLIGYCNDGNEMILVYEFMARGTLSDHLYNSENQPFPWRKRLEMCLGAARGLNYLHTGANHNVIHRDVKTTNILVDEKWVAKVSDFGLSKIGPLGMSRSHISTVVKGSLGYVDPEYYKRQRLTHKSDVYSFGVVLLEVLCGRPPLLRNVEKQKASLVGWVRKCYHEGVIHQTVDPFLIESITPKCLKTFSDMALKCLADDANERPSMSDVVWVLEFALQLQESEEKTELGWTQMKENSGEIGLLWKGMEEEESEAGFTSSDVRRSESKNSKVTTSSSEEQSLVSGIIFSELNNPTLR 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1827 879 MobiDBLite consensus disorder prediction 832 850 - -
Bisa12g1827 879 Gene3D Phosphorylase Kinase; domain 1 484 600 - -
Bisa12g1827 879 Gene3D - 223 413 - -
Bisa12g1827 879 Gene3D - 29 194 - -
Bisa12g1827 879 FunFam Receptor-like protein kinase FERONIA 496 600 - -
Bisa12g1827 879 SUPERFAMILY Protein kinase-like (PK-like) 497 799 IPR011009 -
Bisa12g1827 879 SMART serkin_6 524 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1827 879 Pfam Malectin-like domain 33 411 IPR024788 -
Bisa12g1827 879 FunFam FERONIA receptor-like kinase 223 413 - -
Bisa12g1827 879 FunFam FERONIA receptor-like kinase 30 194 - -
Bisa12g1827 879 MobiDBLite consensus disorder prediction 832 862 - -
Bisa12g1827 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Bisa12g1827 879 ProSiteProfiles Protein kinase domain profile. 524 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1827 879 FunFam Receptor-like protein kinase FERONIA 601 818 - -
Bisa12g1827 879 Gene3D Transferase(Phosphotransferase) domain 1 601 820 - -
Bisa12g1827 879 CDD STKc_IRAK 530 797 - -
Bisa12g1827 879 Pfam Protein tyrosine and serine/threonine kinase 530 793 IPR001245 GO:0004672|GO:0006468
Bisa12g1827 879 PANTHER OS03G0124300 PROTEIN-RELATED 10 488 IPR046957 GO:0004672
Bisa12g1827 879 ProSitePatterns Protein kinases ATP-binding region signature. 530 553 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1827 Bisa-ChrBisa12 39125197 39127836 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1827 20 879 Receptor kinase-like Gene Family AT3G51550 46.007 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bisa12g1827 Malectin_like 5.6e-43 CL0202