Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1823 ATGGCTCTCAAGAGAATCAATGTTGCCGATAGTCAAATCCCTCATGATGGAGACACTGGCATGTTCCGGGACTGGGACGGTGATGATAAAGAGTACTGTGTGAACGTCGAACTGGGTCAGTGGCTAAATGTGACCTTCACACCCAACCGATCGCATCTCGACTCCTACGCTTTCGTCAACAGAATCGAGGTCGTCTCCATGCCCCCTTATCTATATTACACCAACCCAGATGATCAAGAATCGATGCAGCTAAACGGTGAAAACCAACAGTTTCCGGTGACAACCAGCATGGCCCTCGAGATAGCATACAGAATCAACGTTGCCGGTAGTCAAATCCCTGCTGAAAGGGACACCGGCATGTTCCGATCTTGGGACAATGATGATCAGTACGTGGAGACGAAGCCCCAAAAAAGTGAATCCTCAGGTTTTGGTTTAACTATAAAGTATAAAGATGGTCTAGACTATATTGCACCGGACGATGTATACAAGACTGCCCGAAACTATGGGATGAACGAGAAGTCCAAGTATAATGTGACTTGGAACTTCAAAGTGGACCCAGAGTTTGCTTACATGGTGAGACTTCATTTTTGTGAGTTTGAGCAAGAGATTCAATTTGTTGGACAAAGAGTTTTTCAGATCTTCATAGCTGATACTTTGGTTGAGGGTCACGCCGATGTGATCATGTGGAGTGGCGGCAATCTGGTTCCTGTCCATAGGGACTACGCTGTGGTGATGCGCATGGGAGAAGAAAGCTTGAAGAAAATGAATCTTTCAATTAAGTTACGACCACACCCAAATCAAAAAGTAAGCAATTACGATGATGTCATTTTGAACGGTATTGAAATTTTGAAAATAATTAATCCCAATGCTGACCCACGTCTAATTCAAAACTCTCGACCGTTTATGCCATCTAAGAACTCGAAGAAAAGAAGAGTTATAATTTTCGTTGTTGTGGGTGTAGCTTCAGGCTCCGCTGTGCTATCTCTCATTGTTTTCCTGATTTTCCGGCGATTCACTAGAGCTCCAGTCAACAAAGGAAGCTCGTGGTGGGGACAGAAATTTGTATCTATGGACAAGTTAAGCAAGACCCATGGGACATCACTGCCTTCTGATTTGTGTCGTTGCTTTTCAATCGCTGAGGTAAAGGACGCCACTAATAATTTCGATGATATTTTCATAGTGGGAGTGGGAGGGTTTGGTAATGTGTATAAAGGCTACATTGATGATGGTATGGTTCCTGTGGCAATCAAACGGCTCAAACAAGGGTCGCAACAAGGGGCCCACGAGTTCCAGACTGAGATTGAAATGCTCTCTCAACTTCGTCACTTCCATTTAGTGTCTCTAATTGGTTACTGCAACGACGGCAACGAGATGATTCTTGTCTATGAATTCATGGCACGTGGGACTCTCAGTGACCATCTTTACAATTCCGAGAACCAACTAGTTTCTTGGAAGAAACGGTTAGAGTTGTTCCTTGGTGCAGCACGTGGGCTGGACTATCTTCATACAGTGGTGCTATTGGAGGTATTGTGTGGGAGACCACCTTTGCTACGTGCGGTGGAGAAGCAGAAGGCTAGTTTGGTGGACTGGGTTAGGAGATGTCATCATGAGGGTGTGATTCATCAGACTGTTGATCTGGTTCTAATAGAAAGTATCACGCCAGAGTGTTTAAAAGCTTTCAGTGATATGGCACTAAAATGTTTGGTAGATGATGCGAATGAGCGGCCATCAATGAGCGATGTGGTGTGGGTCCTGGAGTTTGCGTTAGAGCTACAAGAGAGCATATAG 1788 0.4474 MALKRINVADSQIPHDGDTGMFRDWDGDDKEYCVNVELGQWLNVTFTPNRSHLDSYAFVNRIEVVSMPPYLYYTNPDDQESMQLNGENQQFPVTTSMALEIAYRINVAGSQIPAERDTGMFRSWDNDDQYVETKPQKSESSGFGLTIKYKDGLDYIAPDDVYKTARNYGMNEKSKYNVTWNFKVDPEFAYMVRLHFCEFEQEIQFVGQRVFQIFIADTLVEGHADVIMWSGGNLVPVHRDYAVVMRMGEESLKKMNLSIKLRPHPNQKVSNYDDVILNGIEILKIINPNADPRLIQNSRPFMPSKNSKKRRVIIFVVVGVASGSAVLSLIVFLIFRRFTRAPVNKGSSWWGQKFVSMDKLSKTHGTSLPSDLCRCFSIAEVKDATNNFDDIFIVGVGGFGNVYKGYIDDGMVPVAIKRLKQGSQQGAHEFQTEIEMLSQLRHFHLVSLIGYCNDGNEMILVYEFMARGTLSDHLYNSENQLVSWKKRLELFLGAARGLDYLHTVVLLEVLCGRPPLLRAVEKQKASLVDWVRRCHHEGVIHQTVDLVLIESITPECLKAFSDMALKCLVDDANERPSMSDVVWVLEFALELQESI 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1823 595 ProSiteProfiles Protein kinase domain profile. 388 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1823 595 Gene3D - 97 286 - -
Bisa12g1823 595 PANTHER OS03G0124300 PROTEIN-RELATED 30 347 IPR046957 GO:0004672
Bisa12g1823 595 SUPERFAMILY Protein kinase-like (PK-like) 373 583 IPR011009 -
Bisa12g1823 595 FunFam Receptor-like protein kinase FERONIA 360 464 - -
Bisa12g1823 595 FunFam FERONIA receptor-like kinase 97 286 - -
Bisa12g1823 595 ProSitePatterns Protein kinases ATP-binding region signature. 394 417 IPR017441 GO:0005524
Bisa12g1823 595 Pfam Malectin-like domain 30 284 IPR024788 -
Bisa12g1823 595 Pfam Protein tyrosine and serine/threonine kinase 394 503 IPR001245 GO:0004672|GO:0006468
Bisa12g1823 595 Gene3D Transferase(Phosphotransferase) domain 1 375 503 - -
Bisa12g1823 595 Gene3D Transferase(Phosphotransferase) domain 1 504 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1823 Bisa-ChrBisa12 39019491 39023256 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1823 500 594 Receptor kinase-like Gene Family AT3G51550 50.526 1.19e-24 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bisa12g1823 Malectin_like 1.2e-29 CL0202