Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1821 ATGGGTTCACTTGAGACCAACACAGCAAGTGAGTTCTTTGAAGCTCAAGCACACTTGTATAACCACATTTTTGGCTACATAAACTGCATGGTTCTGAAATGTTTTGTCCAGCTAAGCATTCCAGACATAATCCACAAGCATGGCCAGCCCATTACTGTTCCTGAATTGATCTCCAATCTGAAAGTTCACCCCTCCAAAACTGGCTACGTGAAGAGGCTTGTGCGCATGTTGGTGCACAACGGCTTCTTGGCTGAAACCACAGTTTGGGAGGAAAGGGGAGAGAAGGAAGCATACTCTCTCACTCCTTCTTCTAAGTTCCTCGTCAAAGGCAAGGAGCCTTGCCTTGTTCCCATGGTGCTAGGGTCCATGGAGACTCGTATGATTGGTTCCTTTGAGTTGTTGGGCAACTGGTTCAGTGGGGAGGAGAAGACGATAGCTGAGAGTGCATTTGGGGTAGGGTGGTGGGATCTACTAAGACATGATCCTGAATATATGACGTTGTTTAATGAAGCAATGGCTTGTGATTCCCAAGGGATCAACCTGGCACTCAGAGACTGCAGGTCAGTTTTCAGAGGGATAGAAACCCTAGTTGATGTAGGTGGTGGCACTGGCACTACTGCTAACATCATTGCAGAGGCTTGTCCCAATCTAAAGTGCACAGTGTTTGATCTTCCTCAAGTGGTGCAAAACTCGTCGGCAAATAATAACAAGAACTTGAGTTACGTTGGAGGGAGCATGTTTGAGTCAATTCCTTCTGCTGATGCTTGGGTTTTACATAATTGGGATGATGAAGATGCCATAAAGATACTAAAGAACTGTAAGGAAGCTGTGTCAGGCAAAGGAGGAGGAAGAAAGGTGATCATCATAGATGCAGTGATTAACGAGAAGAAAGATAAGTACGAAATGAGTGGAGTGAAACTGGTGTTTGACATACTGATGATGGCTAACTTCAGTGGAAAAGAGAGGAATGCAAAAGAATGGGACAGTCTTCTTCTCGCAGCAGGTTTCAAACATTACAACATGGCTCCCTTATTCGGATTCAGGTCTATTATTGAAGCTTATCCTTGA 1068 0.4476 MGSLETNTASEFFEAQAHLYNHIFGYINCMVLKCFVQLSIPDIIHKHGQPITVPELISNLKVHPSKTGYVKRLVRMLVHNGFLAETTVWEERGEKEAYSLTPSSKFLVKGKEPCLVPMVLGSMETRMIGSFELLGNWFSGEEKTIAESAFGVGWWDLLRHDPEYMTLFNEAMACDSQGINLALRDCRSVFRGIETLVDVGGGTGTTANIIAEACPNLKCTVFDLPQVVQNSSANNNKNLSYVGGSMFESIPSADAWVLHNWDDEDAIKILKNCKEAVSGKGGGRKVIIIDAVINEKKDKYEMSGVKLVFDILMMANFSGKERNAKEWDSLLLAAGFKHYNMAPLFGFRSIIEAYP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1821 355 Gene3D Vaccinia Virus protein VP39 108 355 IPR029063 -
Bisa12g1821 355 SUPERFAMILY "Winged helix" DNA-binding domain 9 111 IPR036390 -
Bisa12g1821 355 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Bisa12g1821 355 Gene3D - 2 107 IPR036388 -
Bisa12g1821 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Bisa12g1821 355 FunFam Coniferyl alcohol 9-O-methyltransferase 3 107 - -
Bisa12g1821 355 FunFam O-methyltransferase ZRP4 109 355 - -
Bisa12g1821 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 355 IPR016461 GO:0008168
Bisa12g1821 355 PANTHER O-METHYLTRANSFERASE 13 338 IPR016461 GO:0008168
Bisa12g1821 355 Pfam O-methyltransferase domain 134 337 IPR001077 GO:0008171
Bisa12g1821 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 354 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1821 Bisa-ChrBisa12 38940944 38942105 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1821 30 337 Monolignol Biosynthesis Gene Families AT5G54160 30.000 5.50e-40 143