Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1796 ATGATATGGGTCATAGTCAAATTTATTGATTGATTGGAAAAGCTTGGCTTTGCCTTGTATTACTTGTCATTAAGTCAACTAATTGGAGTACGTAAATACAGAGGATCAATCCCTGAACCACGAATATCTAATCCCAGAAATTTCTGTGTCTGTACTGTCTTATTATCATCATGTTTTCGCCAAAACCCACTACCTTCAATGAGGCTAGCCAAGTTAGCTCCTTGCCTTAATCATACTACAGACCATGGTCATGGGAATTTCAACAAGAAGTTAATGGTAGGAATAGGAGTTGGCTCTTCAATATTTGTTATGCTGTTGATAACTCTCGGGCTTTTAAGAGACTTTGGCTTGGCACGGGCTGTTGGGGGAGATCAAGTTGAAGCAAATACAAATAGGGTGGTTGGAACATATGGTTACATGCCTTCAGAATATGCTGTGCATGGGCATTTCTCAGTGAAATCTGATGTGTTTAGTTTTGGGGTAATAATACTAGAGATAGTCAGTGGAATGAAGAATAGGGAATTTTCCCACCCAGAACACAACCTTAATCTTCTTGGATATATGTGGAGACTTTGGACTGAAGAGAGGCCATTGGAAGTTATAGATAAATTCTTAGGTGAAAGAGTTATGGTGAACTCTACCTAA 645 0.3891 MIWVIVKFIDXLEKLGFALYYLSLSQLIGVRKYRGSIPEPRISNPRNFCVCTVLLSSCFRQNPLPSMRLAKLAPCLNHTTDHGHGNFNKKLMVGIGVGSSIFVMLLITLGLLRDFGLARAVGGDQVEANTNRVVGTYGYMPSEYAVHGHFSVKSDVFSFGVIILEIVSGMKNREFSHPEHNLNLLGYMWRLWTEERPLEVIDKFLGERVMVNST 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1796 214 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 114 206 - -
Bisa12g1796 214 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1796 214 SUPERFAMILY Protein kinase-like (PK-like) 112 191 IPR011009 -
Bisa12g1796 214 Gene3D Transferase(Phosphotransferase) domain 1 99 213 - -
Bisa12g1796 214 Pfam Protein tyrosine and serine/threonine kinase 113 172 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1796 Bisa-ChrBisa12 37804132 37809435 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1796 114 207 Receptor kinase-like Gene Family AT4G23280 57.895 5.52e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa12g1796 PK_Tyr_Ser-Thr 1.2e-09 CL0016