Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1791 ATGCACTCATTTGCTTTTTTGTTTCGTCTATATACTTGTTCAGTTGAAGCTCTACCACCTAGGGTTTATGTGGGTCACTTGATTGACAAAGGGAAGGCCGCGCTTACGGTGACTCCAAGGCCTCTAGAATTTGTGACATTGGATAGTTTGGAGCATTCTGTAGTCAGGGCCTCAGGGGCATTCAAAGTATATCGGGAAGGTTATGTGTTGCTTCGGTTTGCTTCTGCAGTTGGTATGCGCCAATATGACTGGAACAAAAAACAGTCTGCCTTACTTGCTTTAGGTGCCCATGCATCTGATCCATCTGAAGCTGATTGA 318 0.4497 MHSFAFLFRLYTCSVEALPPRVYVGHLIDKGKAALTVTPRPLEFVTLDSLEHSVVRASGAFKVYREGYVLLRFASAVGMRQYDWNKKQSALLALGAHASDPSEAD 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1791 105 Gene3D Transcriptional Coactivator Pc4; Chain A 14 98 IPR009044 GO:0003677|GO:0006355
Bisa12g1791 105 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 16 89 IPR013742 GO:0003697|GO:0006355|GO:0006952
Bisa12g1791 105 SUPERFAMILY ssDNA-binding transcriptional regulator domain 20 93 IPR009044 GO:0003677|GO:0006355
Bisa12g1791 105 Pfam Whirly transcription factor 30 92 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1791 Bisa-ChrBisa12 37132861 37134128 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1791 16 88 Whirly Transcription Factor Family AT1G14410 58.904 3.15e-22 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Bisa12g1791 Whirly 7.8e-13 CL0609