Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1790 ATGAAGGGACGTGTTATATATACTAGAGCAGGTGCATGGAACGGCATTGCTTTTACAGGGTTCCCATCTCAAAAGCCAAATCCAATATATAAATATGAATTTGTATCCAATGAGAAAGAGGTGTATTATAAATCATACTACAGGCCATGGTCATGGGAACTTCAACAAGAAGTTAATGGTAGGAATAGGAGTTGGCTCTTCAATATTTGTTTTGGTCTTGATAACTCTCGGGCTTTCAAGAGGTATATGGAAAAAGAAACTTCAAGAACTAGGAAGCATTCTAAAAGTAGATTGAAGAAGGAAGACATGGATCTGCCAACATTTCATTTATCTATCATAACTGAAGCTACTAACAATTTTTCAAGCAATAATAAATTGGGAGAAGGTGGATTTGGACCAGTGTACAAGGGTATCTTGGCAGATGGGCAAGAGTTAGCTGTCAAAAGGCTATCCAATAATTCGAGTCAAGGATTGGTGGAGTTTAAAAATGAAGTTGTGTTGATTGCAAAACTGCAACACCATAATCTTGTGGAGCTTCTAGGTTGCTGCATTCAAGGAGACGAAAAAATGTTGATTTATGAATATATGCCTAACAAGAGCTTGGACAACTTTATCTTTGATAAAACAAGAAGCAAGATCTTGGATTGGCACCAACGCTTTCAAATTGTTGCTGGCATTGCTCGAGGACTTCTCTATCTTCATCAAGACTCTCGATTGAGAATTATTCACAGAGATCTCAAAACTAGCAATATTCTACTGGATGCCCATATGAACCCAAAAGTTTCAGACTTTGGCTTGGCTCGGGCTATTGGGGGAGACCAAGTTGAAGCAAATACAAATAGGGTGGTTGGAACATATGGTTACATGCCTCCAGAATATGCTGTGCATGGGCATTTCTCAGTGAAATCTGATGTGTTTAGTTTTGGCGTAATAATACTAGAGATAGTAAGTGGAATGAAGAATAGGGAATTTTCTCACCCAGAACACAACATTAATCTTCTTGGATATACATGGAGACTCTGGACAGAAGAGAGGCCATTAGAACTTATAGATAAATTCTTAGGTGAAAGGTTCACTACTTCTGAAGTCATACGATGCATACATGTGGGACTGTTATGCGTACAACAAAAACCAGAAGATAGGCCCAACATGTCCTCTGTGATTCTTATGCTAAATGGTGAGAAATTATTGCCAAGGCCAAAGGCCCCTGGATTTTACACCGAAGGGGATTTGCCAGAGGCAGATTCTTCATCTAGAAGTTGCAATCAATTTATCTCAAATGAGATGTCCCTTAGTGTGGTAGAGGCAAGATAG 1314 0.3896 MKGRVIYTRAGAWNGIAFTGFPSQKPNPIYKYEFVSNEKEVYYKSYYRPWSWELQQEVNGRNRSWLFNICFGLDNSRAFKRYMEKETSRTRKHSKSRLKKEDMDLPTFHLSIITEATNNFSSNNKLGEGGFGPVYKGILADGQELAVKRLSNNSSQGLVEFKNEVVLIAKLQHHNLVELLGCCIQGDEKMLIYEYMPNKSLDNFIFDKTRSKILDWHQRFQIVAGIARGLLYLHQDSRLRIIHRDLKTSNILLDAHMNPKVSDFGLARAIGGDQVEANTNRVVGTYGYMPPEYAVHGHFSVKSDVFSFGVIILEIVSGMKNREFSHPEHNINLLGYTWRLWTEERPLELIDKFLGERFTTSEVIRCIHVGLLCVQQKPEDRPNMSSVILMLNGEKLLPRPKAPGFYTEGDLPEADSSSRSCNQFISNEMSLSVVEAR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1790 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Bisa12g1790 437 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 82 432 - -
Bisa12g1790 437 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 196 399 - -
Bisa12g1790 437 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 84 195 - -
Bisa12g1790 437 Gene3D Transferase(Phosphotransferase) domain 1 196 397 - -
Bisa12g1790 437 ProSiteProfiles Protein kinase domain profile. 120 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1790 437 SUPERFAMILY Protein kinase-like (PK-like) 103 402 IPR011009 -
Bisa12g1790 437 CDD STKc_IRAK 126 393 - -
Bisa12g1790 437 SMART serkin_6 120 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1790 437 Pfam Protein tyrosine and serine/threonine kinase 123 388 IPR001245 GO:0004672|GO:0006468
Bisa12g1790 437 Gene3D Phosphorylase Kinase; domain 1 80 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1790 Bisa-ChrBisa12 36413767 36416187 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1790 82 408 Receptor kinase-like Gene Family AT4G23140 54.303 1.51e-130 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa12g1790 PK_Tyr_Ser-Thr 5.6e-48 CL0016