Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1778 ATGATGGAGAGAGTGTGGGGGAAAGGTGATGGTATTGTGAAGTATGGATCACATTCACAGCATTGGTCATGTTCAGTTGTTGGTGTAGCTGTGAAGGGTAACAAGAAAAGCGAACATGTACTGCAATGGGCATTGGACAAGTTTGTTGCTGAGGGAACAATTGTGTTTAAGCTTATCCATGTCCATGCCTCTGCGTATGGCGTTCCAACACCAATGGGAAATGGCATCCCTATGTCTCAAGTGCGTAATGATGTAGCAGCTGCTTTCAAGAAGGAAGTGGAGTGGCAAACAAATCAAATTCTTTTACCTTACAAGGAAATGTGCGATCAGAGAAAGGTTCTCGTAGATGCAGTAGTGATAGAATCTGATGACGTGGCAACTGCAATAGCAGAGGAAGTTGCCAAGTGTACCATAACCAAACTGGTTATTGGAGCTTCATCTCATGTCATATTTGCAAGTAAACTGAAGGGAGTATGTGCAAAAATCTCAGCATGCAGTCCAAGATTTTGTACAGTTTATGCAGTTTCCAAAGGGAAATTGTTTTCTTTACGACCATCAGATCTAGAGGTTGACGAAAGCCCAGTAGATGACAATAGTGCCACCAGTTGTTCCACTAATACCTCTTCAAACTACACTTCCACATCTCTCACAGACTCCGGCTCAGTTTCATCGTATTTTCCTTTGTGTTCCTCTTCCCTATCAACACAGAGATATCAAGCTCTTTCAACCATTAATCAGACCCTTCAAAGCACTAGGAATAACCACTCAACAAATTCAGAAGACACTGACTATGCTCTGAGGCGAGCCTCTAGTTGCAGAGGCAATCTATCAGATATTGAATTTTGGAATTATTATCAAAGTCCCACTAGGGATTTTCCTCCAGCGATTCAACTTCCTTCGCCGGATAGGCAGGAAAATGTTTACCTTGAGCTGGAAAAGCTGAGAATTGAGCTAAAGCATGCACAAGGAATGCAAACAATAGCTGAGAATCTGAACATTAATGCATCGCAAAAGCTGAACAATCTAACCAAAAGGCGATTAGAGGAATCAATGAAACTGAAGGAAATTATATCTAAGGAGGAGATGGCCAAAAAAGTAGCAACACGAGAGAGAGAGAAATGTGAAGCTGCACAAAGAGAAGCCGCTTATTTTCAAAGATGTGCTGAAGAGGAAGCCATAGAAAGAAGAGAAGCAGAGATTGAAGCTGCTCGAGCAGCCAGAAATAACGAAAGGCTGGAGGATACTCTTAGTGGTTCCAAGCTTCAGCATAAGAACTTCACTTGGGATGAAATAGTCTCAGCTACCTCATCTTTCTCTCAAGAGTTTAGAATTGGAAGTGGAGCATGTGGAACTGTGTATAAGTGCAATTTGTATCATACAACCGGTGCGGTAAAAGTTCTCCACTCTAAAGAGAATCACAGTGTCAAGCAACTCCAGCAAGAGCTAGAAATCTTGAGCAGAATCCGTCATCCAAATTTGCTTCTCCTTCTTGGGGCATGTCCTGATCAAGGATGCCTGGTGTACGAATACATGGATAATGGTAGCTTGGAGGATAGGAACTACCCCAATCCCATGGTTCAAGAGATTGGTGACATTGGCCTTTCTGCAATGCTTCATTCGGATACCTTGTTGTCCAAGGAAACCCAGCCAGTTGGGACACTCTCTTACATAGATCCTGAGTATCAAAGAACAGGAATATTATCTCCAAAATCCGATGTTTATGCTTTTGGAATAGTGATCCTACAGTTACTGACGGCAAAACCAGCAAGGGCACTTACTCATGTGGTTGAAACAGCAATTGATGATGGAAATTTAGTGGATATATTGGACGCTGAGGCAGGGAATTGGCCTTTTCAGGAGACTCTGGACTTAGCTCGATTAGGCCTAAGTTGCGCAGAACTTCGGCGTAGAGATAGGCCTGATTTGAGTGATCACATACTTCCCATGTTGGAAAGATTAAAAGAAGTTGCTGATAGGGCCGCCGTTGTTTCTTCAACTGTTTTCCTTCAAACCAGACCTCCTAATCACTTCATCTGTCCAATACTTCAGGATGTGATGGAGGATCCTTGTGTTGCTGGGGATGGATACACATATGATCACAAAGCAATTGTAACATGGTTGCAAAAGAATGACAAATCACCAATCACTAACATGCCATTGCCTCACAAGAATCTGATTCCTAATTACACGCTTCTATCAGCTATTTTGGAGTGGAAATCCGAGGAAGAGTCATACAAGCATCGGTAA 2247 0.4255 MMERVWGKGDGIVKYGSHSQHWSCSVVGVAVKGNKKSEHVLQWALDKFVAEGTIVFKLIHVHASAYGVPTPMGNGIPMSQVRNDVAAAFKKEVEWQTNQILLPYKEMCDQRKVLVDAVVIESDDVATAIAEEVAKCTITKLVIGASSHVIFASKLKGVCAKISACSPRFCTVYAVSKGKLFSLRPSDLEVDESPVDDNSATSCSTNTSSNYTSTSLTDSGSVSSYFPLCSSSLSTQRYQALSTINQTLQSTRNNHSTNSEDTDYALRRASSCRGNLSDIEFWNYYQSPTRDFPPAIQLPSPDRQENVYLELEKLRIELKHAQGMQTIAENLNINASQKLNNLTKRRLEESMKLKEIISKEEMAKKVATREREKCEAAQREAAYFQRCAEEEAIERREAEIEAARAARNNERLEDTLSGSKLQHKNFTWDEIVSATSSFSQEFRIGSGACGTVYKCNLYHTTGAVKVLHSKENHSVKQLQQELEILSRIRHPNLLLLLGACPDQGCLVYEYMDNGSLEDRNYPNPMVQEIGDIGLSAMLHSDTLLSKETQPVGTLSYIDPEYQRTGILSPKSDVYAFGIVILQLLTAKPARALTHVVETAIDDGNLVDILDAEAGNWPFQETLDLARLGLSCAELRRRDRPDLSDHILPMLERLKEVADRAAVVSSTVFLQTRPPNHFICPILQDVMEDPCVAGDGYTYDHKAIVTWLQKNDKSPITNMPLPHKNLIPNYTLLSAILEWKSEEESYKHR 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1778 748 CDD STK_N 26 178 - -
Bisa12g1778 748 Gene3D Transferase(Phosphotransferase) domain 1 416 524 - -
Bisa12g1778 748 Gene3D Transferase(Phosphotransferase) domain 1 525 670 - -
Bisa12g1778 748 CDD RING-Ubox_WDSUB1-like 674 728 - -
Bisa12g1778 748 PANTHER OS02G0152300 PROTEIN 26 519 - -
Bisa12g1778 748 ProSiteProfiles U-box domain profile. 672 745 IPR003613 GO:0004842|GO:0016567
Bisa12g1778 748 Pfam U-box domain 674 743 IPR003613 GO:0004842|GO:0016567
Bisa12g1778 748 SUPERFAMILY Protein kinase-like (PK-like) 421 644 IPR011009 -
Bisa12g1778 748 Gene3D HUPs 21 157 IPR014729 -
Bisa12g1778 748 MobiDBLite consensus disorder prediction 192 216 - -
Bisa12g1778 748 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 672 747 IPR013083 -
Bisa12g1778 748 SUPERFAMILY RING/U-box 670 742 - -
Bisa12g1778 748 SMART Ubox_2 676 738 IPR003613 GO:0004842|GO:0016567
Bisa12g1778 748 Pfam Protein tyrosine and serine/threonine kinase 526 642 IPR001245 GO:0004672|GO:0006468
Bisa12g1778 748 Pfam Protein tyrosine and serine/threonine kinase 443 518 IPR001245 GO:0004672|GO:0006468
Bisa12g1778 748 ProSiteProfiles Protein kinase domain profile. 336 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1778 748 Coils Coil 388 422 - -
Bisa12g1778 748 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 28 155 - -
Bisa12g1778 748 MobiDBLite consensus disorder prediction 195 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1778 Bisa-ChrBisa12 36044191 36057033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1778 27 740 U-box Gene Family AT4G25160 44.785 0.0 658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bisa12g1778 PK_Tyr_Ser-Thr 1.7e-06 CL0016