Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1727 ATGAAAGAACAAGAAGAAAATAAGATCCAGGTGAAACACCCTATAGTAGAAGGTCTGAAGGAAGCTGATGATGAAATAATTTTGACTTATGATGAAAGTGCTATAGACAGAGACGTTTCATCTATTGCTGCCTTACCAATTATATGTTCGTTCTGGGGGAGACAAGAGCCTATGTCAAACAAAGCAATGATTGCTATGCAAGGATATAGCAATCATTGTTTTGGAAATATTAGCATTGTTAACTCTCCAGAGTCCTATAATGGTAAGTTATTCATCAGTGGAATATCATGGGACACAAATGAAGAATGGCTCAGAGAGTATTTCAATACTAATGGGGAAGTTGTAGAAGCAATGATTATGAAGAATCAAACAACAGGTAGAGCCTATGGGTTTGGTTTTGTTGTCTTTGCCGATCCAACTATTACAAATAGAGTCATAAAAGAGAAGCACAATCTTAATGGAAGGATGGATGAGGCAAAGAAGGTTGTTCCCAAAGATGATCAAAACATACTAAGTAGAAATAGTGGTAGCAACCATGGTTTTCCTGGTACTGTTAAAGGCTTTGGACTCATGATGGATGACGAATTCAGTCTTGATGCAAGTAATCGTAGTGGATTTTCTCTAGTTGGATCCGGCTATGGAATGAATATGAAGTTTGAACTTGGTTTGAATACTGGCTTTGGGGAAAATGCAAATTTTAATAAAAATCCTAACTATGCTCCGGGGTTAAATCCTTATCATATCGGTAGCTTAAATAGGTTAGGCAATCCTATGGGCTATGATGGTGGTAATGGAGAAAACTATTCTTTCTTTAGCTCTATGACTCAGAATTTGTGGGAAAATGGCAGCCTTAGTTATGGAACAAACACTGCAAATTCCAATGCATACATGGGTTCAGGAAGTGCAAATGTTGAGGGAAATACATATAGCAATACTGGAGTTAATTGGGGGTTCTAG 957 0.3741 MKEQEENKIQVKHPIVEGLKEADDEIILTYDESAIDRDVSSIAALPIICSFWGRQEPMSNKAMIAMQGYSNHCFGNISIVNSPESYNGKLFISGISWDTNEEWLREYFNTNGEVVEAMIMKNQTTGRAYGFGFVVFADPTITNRVIKEKHNLNGRMDEAKKVVPKDDQNILSRNSGSNHGFPGTVKGFGLMMDDEFSLDASNRSGFSLVGSGYGMNMKFELGLNTGFGENANFNKNPNYAPGLNPYHIGSLNRLGNPMGYDGGNGENYSFFSSMTQNLWENGSLSYGTNTANSNAYMGSGSANVEGNTYSNTGVNWGF 318
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1727 318 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 90 151 IPR000504 GO:0003723
Bisa12g1727 318 SUPERFAMILY RNA-binding domain, RBD 78 182 IPR035979 GO:0003676
Bisa12g1727 318 PANTHER RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 190 317 - -
Bisa12g1727 318 SMART rrm1_1 89 160 IPR000504 GO:0003723
Bisa12g1727 318 Gene3D - 87 170 IPR012677 -
Bisa12g1727 318 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 88 162 IPR000504 GO:0003723
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa12g1727 Bisa-ChrBisa12 33647645 33649086 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1727 14 84 Phospholipase D Gene Family (Wang group) AT3G16785 50.704 1.04e-10 60.8