Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1725 ATGACTTGCGCCAAAGCAATGACTGATGATCCTAAGTATGTGAGCACTGCTGCATCATGCATGGGTGAGAACAAGGGAGGAGGGCCACACACTTATGCATTTGTAACTAATAACTCTTATTTATACGCCAAGGATGTCGGAGTTGGGTGCCATGTGAAGTGGGCTGCTTTGGTATCTGCAGACAATGCTTCGTATGATGATTATGGCTCCTATGCTGCCATTCACCGGTTGTTGGTCCAAGGATTCCAGCTTTCATGGTCTCGATTTTACCAGTGTGATGTTCTCTATTATAACTTTTACGTCCACCACAAATGCGGCATCTGGAGAACATTACAAGTTTATGCAAGTGTATGGAGGTTCATACTGCCAGAGTTGGCAATACTTCTTCAAGCCGCAAAAGTAGTTGTGGGGATGCCTTGTGTCATCATTCTTTTGCTCTGTAAATGGCGAACGAGGCACCGGTGCATGTACGACAACATTGAAGAATTTCTACAGAGTAACAACAATATGTCACCAATAAGGTATTCTTACAAAGAGATCAAGAATATGACCAGTGCTTTTAAGGACCAACTGGGTGAAGGTGGCTTTGGCATTGTTTTCAAGGGAAAGCTCCGAAGTAGACATTTGGTGGCAGTGAAGATGCTAAGTAAGTCCAAAGGCAATGGTCAAGATTTTATAAATGAGGTTGGCACAATTGGAAGAATTCATCATGTCAATGTAGTGCGACTTATAGGATATTGTGTTGAAGGCTCAAAGCATGCTCTCGTGTATGAATTTATGCCCAATGGTTCTCTTGACAAATACATTTTCACCAAAGAAAAAGATATAACATTGAGTCTAAGCAAGATTTATGAGATTTCTATTGGCATGGCTCGTGGAATTGCTTATTTACATCATGGTTATGACATGCAGATTTTGCATTTTGATCTCAAACCTCACAACATTCTTCTTGATGAGAACTTCACACCAAAGTTATCAGACTTTGGACTAGCAAAACTTTATCCTATAGATGAAAGCATTGTACCATTGACTGCAGCAAGAGGAACTATAGGGTACATGGCTCCAGAATTATTCTACAAAAACATTGGGGGTGTATCCTACAAAGCTGATGTGTATAGTTTTGGGATGTTGTTGCTGGAAATGGCAGGACAGAGGAAGAATTTGAATCCATCTATAGAGAATTCAAGCCAAATTTACTTCCCTACTTGGATTTATAACCAGTTCATTATGGGAAATGAGACAGAGATCACAGATGCTACTGAAGAAGAAAAGAAACTAGTAAATAAAATGATTATAGTGGCCTTCTGGTGTATACAAATGAAGCCAGCAGATCGTCCATCTATGAAGAAAGTGGTTGATATGCTTGAAAGTGAAGTCGAATCTCTAGAAACACCTCATAAACCTTTTTCATCCATGCTAGATTTACCAGAAAGCAATGCTTCAATCCATACAAAACCAACTTCACCTTTAGTTGATGTAGTTGGTTCATCAAAATCAGAATCTGACAGTTTAATTTTGAATGCAGCTTAG 1530 0.3954 MTCAKAMTDDPKYVSTAASCMGENKGGGPHTYAFVTNNSYLYAKDVGVGCHVKWAALVSADNASYDDYGSYAAIHRLLVQGFQLSWSRFYQCDVLYYNFYVHHKCGIWRTLQVYASVWRFILPELAILLQAAKVVVGMPCVIILLLCKWRTRHRCMYDNIEEFLQSNNNMSPIRYSYKEIKNMTSAFKDQLGEGGFGIVFKGKLRSRHLVAVKMLSKSKGNGQDFINEVGTIGRIHHVNVVRLIGYCVEGSKHALVYEFMPNGSLDKYIFTKEKDITLSLSKIYEISIGMARGIAYLHHGYDMQILHFDLKPHNILLDENFTPKLSDFGLAKLYPIDESIVPLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLLEMAGQRKNLNPSIENSSQIYFPTWIYNQFIMGNETEITDATEEEKKLVNKMIIVAFWCIQMKPADRPSMKKVVDMLESEVESLETPHKPFSSMLDLPESNASIHTKPTSPLVDVVGSSKSESDSLILNAA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1725 509 ProSiteProfiles Protein kinase domain profile. 185 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1725 509 FunFam serine/threonine-protein kinase PBS1-like 156 259 - -
Bisa12g1725 509 Gene3D Phosphorylase Kinase; domain 1 158 259 - -
Bisa12g1725 509 Gene3D Transferase(Phosphotransferase) domain 1 260 473 - -
Bisa12g1725 509 Pfam Protein kinase domain 188 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1725 509 SMART serkin_6 185 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1725 509 FunFam PR5-like receptor kinase 260 466 - -
Bisa12g1725 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Bisa12g1725 509 PANTHER RUST RESISTANCE KINASE LR10-RELATED 157 475 IPR045874 GO:0004672
Bisa12g1725 509 SUPERFAMILY Protein kinase-like (PK-like) 164 456 IPR011009 -
Bisa12g1725 509 ProSitePatterns Protein kinases ATP-binding region signature. 191 213 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1725 Bisa-ChrBisa12 33570881 33575743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1725 174 478 Receptor kinase-like Gene Family AT5G38280 49.679 9.67e-103 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Bisa12g1725 Pkinase 4.4e-47 CL0016