Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1721 ATGAAACGGTCTTCTAGTGCTTCTTTATCCTCTTGTTCTTCATCACCAGCATCTTCTTCTTCTTCGTCGTTTTCTTCTGTGGAGTTTCAGAATCCCGATCAAGCCGACGACGGAGGCAGAGGCAGTAACAATAAGCGAGCCAGACGGAGTAATAATAATAATAGTTTTAACAATAACGGTAATCTGAAGAAGTCGCAGAAGCCGAAATCGATCAGAAGCTCGAGCTCGGCCGCCATTAATGGCGGACGACGAAGCTCCGTTTACAGAGGCGTCACCAGGCATCGATGGACTGGGAGGTTCGAAGCTCATCTCTGGGATAAGAGTTCCTGGAACAGCCTCCAGAATAAGAAGGGACGACAAGGGGCTTATGATAATGAAGAAGCTGCTGCTCGTACCTATGATCTCGCTGCCCTGAAATATTGGGGAAGAGATACAGCATTGAATTTTCCGATAGAAACATATACCAAGGAGCTCGAAGAAATGGAGAAGGTCACAAAAGAAGAGTATTTAGCTTCGTTGCGACGACAAAGCAGTGGATTTTCAAGAGGGGTTTCTAAGTACCGAGGGGTGGCTAGGCATCACCATAATGGTCGATGGGAAGCTCGAATTGGAAGAGTATTAGGCAACAAATATCTCTACTTGGGGACATACAGTACTCAAGAGGAGGCAGCTATGGCATATGATAGAGCAGCCATAAAATATAGAGGAGCAAATGCAGTGACCAATTTCGACACCAGCAACTACGTCGAGATAAACAACAAGAAGAAAAAGAACGAACAATCCCAAGAAGAAACAGTGATCACAGCAACGTCATCACAAGAAGAAACAGACGCCAATTCCTCCTCATCCTGCTTCGAATCCGAAAATCCGCAGAAGCAGCAAGAGCAACAAGAAATTGAACTTCAACCTGAAAATCCCAATGTCCAACCCGCCCAAATCCCTCAACCCAGCGAGGAATCATCACCGGTCGCTCCTAACGACCCTCTGGCCGCCGACCAACAAGATCTTCCATGGATTTTCATGGACGACGACGGATTCTCCCAGTTTCAAGTTCCAGATCTGCACGAAGGCGATTTGCTGAACATATTCCATGACGGCGGAGGAAAATTCGAGGACGACATCAATTTTCTATTTAGGTCAGAACCCGAAGCTGGCTATTTCAATCTGGACGCGATTTTGAACGGCCCGAGCTACGGAGATATGGTAATGGGGGATTCGACGACGATCAGGGTGGACGATGATGATTGTGGTGGATCGGAGAAGTTGCAGCGTACTGCAACTGCAACTTCTCCTTCTGCTTCTCCGAACTCTTCGATTTCTTCTTCTGAGTATACCCCATGA 1341 0.4691 MKRSSSASLSSCSSSPASSSSSSFSSVEFQNPDQADDGGRGSNNKRARRSNNNNSFNNNGNLKKSQKPKSIRSSSSAAINGGRRSSVYRGVTRHRWTGRFEAHLWDKSSWNSLQNKKGRQGAYDNEEAAARTYDLAALKYWGRDTALNFPIETYTKELEEMEKVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTYSTQEEAAMAYDRAAIKYRGANAVTNFDTSNYVEINNKKKKNEQSQEETVITATSSQEETDANSSSSCFESENPQKQQEQQEIELQPENPNVQPAQIPQPSEESSPVAPNDPLAADQQDLPWIFMDDDGFSQFQVPDLHEGDLLNIFHDGGGKFEDDINFLFRSEPEAGYFNLDAILNGPSYGDMVMGDSTTIRVDDDDCGGSEKLQRTATATSPSASPNSSISSSEYTP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1721 446 MobiDBLite consensus disorder prediction 412 446 - -
Bisa12g1721 446 FunFam AP2-like ethylene-responsive transcription factor 86 152 - -
Bisa12g1721 446 CDD AP2 86 151 IPR001471 GO:0003700|GO:0006355
Bisa12g1721 446 MobiDBLite consensus disorder prediction 1 81 - -
Bisa12g1721 446 MobiDBLite consensus disorder prediction 45 81 - -
Bisa12g1721 446 MobiDBLite consensus disorder prediction 263 322 - -
Bisa12g1721 446 FunFam AP2-like ethylene-responsive transcription factor 185 246 - -
Bisa12g1721 446 ProSiteProfiles AP2/ERF domain profile. 87 150 IPR001471 GO:0003700|GO:0006355
Bisa12g1721 446 CDD AP2 185 246 IPR001471 GO:0003700|GO:0006355
Bisa12g1721 446 MobiDBLite consensus disorder prediction 254 330 - -
Bisa12g1721 446 SUPERFAMILY DNA-binding domain 86 152 IPR016177 GO:0003677
Bisa12g1721 446 MobiDBLite consensus disorder prediction 422 446 - -
Bisa12g1721 446 MobiDBLite consensus disorder prediction 1 38 - -
Bisa12g1721 446 ProSiteProfiles AP2/ERF domain profile. 186 244 IPR001471 GO:0003700|GO:0006355
Bisa12g1721 446 SMART rav1_2 87 156 IPR001471 GO:0003700|GO:0006355
Bisa12g1721 446 SMART rav1_2 186 250 IPR001471 GO:0003700|GO:0006355
Bisa12g1721 446 Gene3D AP2/ERF domain 87 152 IPR036955 GO:0003700|GO:0006355
Bisa12g1721 446 Gene3D AP2/ERF domain 185 246 IPR036955 GO:0003700|GO:0006355
Bisa12g1721 446 SUPERFAMILY DNA-binding domain 185 246 IPR016177 GO:0003677
Bisa12g1721 446 PRINTS Ethylene responsive element binding protein signature 88 99 IPR001471 GO:0003700|GO:0006355
Bisa12g1721 446 PRINTS Ethylene responsive element binding protein signature 226 246 IPR001471 GO:0003700|GO:0006355
Bisa12g1721 446 Pfam AP2 domain 86 142 IPR001471 GO:0003700|GO:0006355
Bisa12g1721 446 Pfam AP2 domain 185 236 IPR001471 GO:0003700|GO:0006355
Bisa12g1721 446 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 29 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1721 Bisa-ChrBisa12 33453587 33461261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1721 82 248 AP2-EREBP Transcription Factor Family AT5G57390 70.000 8.93e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bisa12g1721 AP2 1.4e-08 CL0081