Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1720 ATGGTGGAAAGCTTGCGGTTTGAGAATGGGGAGACATTTGTGTGTTGTGACATTGCCATTCTCTCTGCCCCTCTCTTTCTGGGAGGAGGAGGGAACGTAGGTTCAAGTAGTGACATCTCCTTTCAAGGAAAACTATCAATCATCATACATTGTGTTGTCATGGATGTTGAAGCAGTGGATGAAGGAGAAAACAGTGATAGATTTGCTGCTGAGAAAGTTGAACCTGATAAGGGCCAGAGACAGAATGTAACTGTAAACTTGGCTGAAAGTGCAGTAATTAATCACACTGGTGATGCAAATCTGAAACCACAAGTAGGTATGCTGTTTGAAACGGAAGATGCTGCAAGGTCATTTTATGATGCATATGCAAGGCATGAGGGCTTTAGCATCCATGTTGGTCAGTTCAGCCGTACAAAGCCTGATGGTCCAATTGTAACTTGGGACTTCTCTTGTACGAGGGAGGTATTTAAAAGGAAGAACATAGAAAGTTGCAATGCAATGCTTAGAATAGAGAGAAAAGATGCAAACAGCTGGACAGTGACAAAATTTGTTGATGAACATAACCATTCCCTAGCTTCCCATAGTAAGGTGCAGTACCTTCGACCTCGTAGGCATTTTGCAGGTGCTACAAGAAATGTTTCTGAGACATTCAATGCAACTAGTGATACCCATGCCTTCACAGATGGCAGTCATGTATTTCATGAATCAAATCATGTAGTCAGGAGTTCCTCTCCAGTAGAACAAAATCACTTGGCCAGAAACATAGGTACTTTAACATATCTAAGACCCTCTCGAAAGAGGATCCTTGGAAGAGATGCTCAAAATCTTCTGAATTATTTCAAGAAGATGCAAGCAGAAAACCCTGGTTTCTATTATGCTATACAGCTTGACGATGAGAACCGCATGACCAATGTATTTTGGGCTGATGCAAGATCAAGAGCAGCCTATAATTACTTTGGTGATGCTGTAGTTTTTGATACAACGTATAGACCAAATCAATACCAAGTCCCATTTGCTCCCTTTACAGGGGTCAATCATCATGGTCAGATAGTTTTATTTGGTTGTGCATTACTTTTGGATGAATCAGAGTCTTCTTTTACTTGGCTGTTCAAGACATGGCTATCTGCTATGAATGATCGACCACCTGTTTCAATAACTACAGACCAAGATAGAGCCATTCAAGCTGCTATTGCCCAGGCCTTTCCGGAAACTCGCCACTGTATTTGTAAGTGGCACATATTGAGGGAAGGTCAAGAAAGATTGGCTCATATTTACCTAGCTCATCCTTCCTTTTATGGGGAGCTGTATAGCTGTATCAATTTCTCTGAGACTGTTGAGGACTTTGAATCAACATGGCATTCTCTCCTAGATAAATATGACCTTCAGAAAAATGAGTGGCTTCAGGCAGTGTATAATGCTCGCAAACAGTGGGCCCCTGTTTATTTCCGCAGGACGTTCTTTGCTGCACTTACTTCAAATCATGGGGTTAGCTCCATTTTTGATGGCTATGTGAATCAGCAGACAAACTTACCTCTATTCTTTAAGCAGTACGAAAGAGCACTAGAAGATTCATTGCAAAAAGAAATAGAGGCTGACTATGATACAATTTGCACCACACCAGTATTGAAGACTCCATCACCGATGGAACAACAGGCTGCAAATATATACACTAAGAAAATTTTTGCAAAGTTTCAGGAGGAACTGGTGGAAACTTTTGTGTATACTGCAAATAATATTGAGGGTGATGGTGTGGTCAATAATTGTAAATACAGGGTTGCAAAATATGAGCATGATCACAAGGCATACATGGTCACTTTAGATGTTTCTGAATTGAAAGCAAATTGCAGCTGTCAGATGTTTGAATATTCAGGCATCCTTTGCAGACATATTTTGACTGTATTTACAGTCACAAATGTTCTTACCCTTCCCCTGCACTACATTTTGAAGCGATGGACAAGGAATGCAAAATTCAGTATTCAGTCAGATGATCAGATTCCAGATCCACAAGGCATTGAAACTCTCACCTCGCGTTTCAATAGTCTATGTCGAGAAGCCGTTAAATTTGCTGAAGAAGGAGCAATAGCTGTGGAGACTTATAATGCAGCAATTAATGCTTTGAGAGAGGGTGGGAAAAAGGTTGCTGTTGTGAAGAAAAATGTTGCAAAAGTCACACCTCCAAGTACTCAAGGTAATGGAGGTAGTCAGGAAGACCATAGCAAGAAGAGCCCTTCGTCAATTTGGCAAGATCCAGTGTCACATCGCTTTAATCTTAATGACATGGGGCTTCCTGTTGCTGATCTGAATCAGCCTAGTATGGCTCCTGTTTCTATTCACCGCGATGGTGGCCCTCTTGATAACCCTGTTGTCCTCATTTATTTCAAGTCTATGACTTGGGTCATCGAAAATAAGAATTCAACCTCAGCCAGCAAAGTTGCAGTGATTAACTTGAAGCTGCAAGATTATGGCAAGAACCCTTCAGCTGAGACCGAAGTGCAATTTAGGGTAACAAGGGTCACTTTGGAGCCTATGATAAGATCTATGGCTTATATCAGTCAGCAGCTCTCTACACCAGTCAATAGAGTTGCTGTCATCAATCTGAAGCTCCAGGATACAAAGACATCTGCTGGGGAAACAGAAGTGAAATTCCAAGTTTCCAGGGATACACTTGGTTCCATGCTTCGATCTATGGCCTACATCCGAGAGCAGCTATGA 2712 0.4152 MVESLRFENGETFVCCDIAILSAPLFLGGGGNVGSSSDISFQGKLSIIIHCVVMDVEAVDEGENSDRFAAEKVEPDKGQRQNVTVNLAESAVINHTGDANLKPQVGMLFETEDAARSFYDAYARHEGFSIHVGQFSRTKPDGPIVTWDFSCTREVFKRKNIESCNAMLRIERKDANSWTVTKFVDEHNHSLASHSKVQYLRPRRHFAGATRNVSETFNATSDTHAFTDGSHVFHESNHVVRSSSPVEQNHLARNIGTLTYLRPSRKRILGRDAQNLLNYFKKMQAENPGFYYAIQLDDENRMTNVFWADARSRAAYNYFGDAVVFDTTYRPNQYQVPFAPFTGVNHHGQIVLFGCALLLDESESSFTWLFKTWLSAMNDRPPVSITTDQDRAIQAAIAQAFPETRHCICKWHILREGQERLAHIYLAHPSFYGELYSCINFSETVEDFESTWHSLLDKYDLQKNEWLQAVYNARKQWAPVYFRRTFFAALTSNHGVSSIFDGYVNQQTNLPLFFKQYERALEDSLQKEIEADYDTICTTPVLKTPSPMEQQAANIYTKKIFAKFQEELVETFVYTANNIEGDGVVNNCKYRVAKYEHDHKAYMVTLDVSELKANCSCQMFEYSGILCRHILTVFTVTNVLTLPLHYILKRWTRNAKFSIQSDDQIPDPQGIETLTSRFNSLCREAVKFAEEGAIAVETYNAAINALREGGKKVAVVKKNVAKVTPPSTQGNGGSQEDHSKKSPSSIWQDPVSHRFNLNDMGLPVADLNQPSMAPVSIHRDGGPLDNPVVLIYFKSMTWVIENKNSTSASKVAVINLKLQDYGKNPSAETEVQFRVTRVTLEPMIRSMAYISQQLSTPVNRVAVINLKLQDTKTSAGETEVKFQVSRDTLGSMLRSMAYIREQL 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1720 903 MobiDBLite consensus disorder prediction 722 750 - -
Bisa12g1720 903 Pfam MULE transposase domain 323 415 IPR018289 -
Bisa12g1720 903 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 714 IPR031052 GO:0006355
Bisa12g1720 903 Pfam FAR1 DNA-binding domain 117 192 IPR004330 -
Bisa12g1720 903 ProSiteProfiles Zinc finger SWIM-type profile. 602 638 IPR007527 GO:0008270
Bisa12g1720 903 SMART 26again6 613 640 IPR006564 GO:0008270
Bisa12g1720 903 MobiDBLite consensus disorder prediction 721 750 - -
Bisa12g1720 903 Pfam SWIM zinc finger 604 636 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1720 Bisa-ChrBisa12 33431326 33443597 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bisa12g1720 MULE 9.7e-29 CL0219