Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1717 ATGGGAATGGAAACCAGAAGGCTTTCAGATGAATATGAAGTATCAGAGGTCTTAGGAAGAGGAGGATTCTCTGTTGTGAGAAAAGGCACTAAAAATTCAAGCAGTGAGAAAACACAGGTAGCCATAAAAACACTGAGAAGGTTAGGTACCTCGAATCCTTCTACCGGATTACCAAGAACCCAGAAAGGCGAAAAGAGCATAGCTCCAAGCGTGGGGTTCCCAACTTGGAGACAAGTTTCAATATCAGACGCCTTACTCACCAATGAGATCTTGGTCATGAGGAAGATAGTGGAGAACGTTTCACCCCATCCAAATGTCATTGACCTCTACGATGTTTATGAGGACTCGAACGGGGTTCATCTTGTTCTCGAGCTTTGTTCTGGTGGCGAGTTGTTCGACCGGATTGTGGCACAAGAGAAGTATGCAGAGGTGAGAGCTGCAGCTGTAATTCATCAGATTGCAAGTGGATTAGAGGCTATTCACAGAGCTAATATTGTGCATAGGGACTTGAAGCCTGAGAACTGCTTGTTCCTGGACAGTAGGGAGAATTCTCCTCTGAAGATCATGGACTTTGGGTTGAGTTCTGTAGAGGAATTTACTGACCCAGTAGTTGGCTTATTTGGATCCATTGATTATGTTTCACCAGAGGCTCTTTCTCAAGGAAAGATAACAACTAAGAGTGACATGTGGTCTGTGGGAGTAATTTTGTATATCTTACTCTCTGGGTATCCGCCTTTCATTGCTCAGTCTAATCGCCAAAAGCAACAAATGATCATGTCTGGGAGTTTCAGTTTTTATGAGAAGTCTTGGAAGGGCATTTCCTCATCAGCGAAGCAATTGATTTCAAGTCTCCTGGCTGTTGATCCTCACAGGAGACCTAGTGCTCAAGAGCTTCTCAGTCATCCATGGGTCAGAGGAGAAATAGCTAAAGATGATCAAATGGACCCTGAGATTGTTGCAAGATTGCAAAGTTTTAATGCTCGTCGTAAACTCCGCGCAGCTGCAATTGCTAGTGTATGGACCAGCACTGTTTTCTTGAGGATGAAAAAATTGAAATCCCTGTTAGGATCCTACGATCTCACAGAAGAGGAAATAGAAAATCTCAAGATACACTTCAAGAATATATGTGCAGACAGAGACAATGCCACTCTTTCTGAATTTGAGGAGGTGCTAAAAGCAATGAATATGCCATCACTTATCCCTCTTGCACCACGCATATTTGACCTATTTGACAACAATCGTGATGGAACAGTTGACATGCGGGAGATACTCTGTGGGTTTTCCAGCCTCAAGAATTCAAAAGGCGATGATGCTCTCCGGCTGTGTTTCCAGATGTATGACACGGATCGATCTGGATGCATAACTAAGGAAGAAGTAGCATCTATGCTCAGAGCTTTGCCAGATGACTGCCTACCAGCTGATATCACTGAACCAGGGAAATTGGACGAGATATTTGACCGGATGGATGCCAACAGTGATGGAAAAGTTACCTTTGAAGAATTCAAAGCTGCTATGCAGAGAGATAGCTCTCTGCAAGATGTAGTCCTTTCCTCTCTTCGGCCATCATAG 1569 0.4379 MGMETRRLSDEYEVSEVLGRGGFSVVRKGTKNSSSEKTQVAIKTLRRLGTSNPSTGLPRTQKGEKSIAPSVGFPTWRQVSISDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDSNGVHLVLELCSGGELFDRIVAQEKYAEVRAAAVIHQIASGLEAIHRANIVHRDLKPENCLFLDSRENSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITTKSDMWSVGVILYILLSGYPPFIAQSNRQKQQMIMSGSFSFYEKSWKGISSSAKQLISSLLAVDPHRRPSAQELLSHPWVRGEIAKDDQMDPEIVARLQSFNARRKLRAAAIASVWTSTVFLRMKKLKSLLGSYDLTEEEIENLKIHFKNICADRDNATLSEFEEVLKAMNMPSLIPLAPRIFDLFDNNRDGTVDMREILCGFSSLKNSKGDDALRLCFQMYDTDRSGCITKEEVASMLRALPDDCLPADITEPGKLDEIFDRMDANSDGKVTFEEFKAAMQRDSSLQDVVLSSLRPS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1717 522 ProSiteProfiles EF-hand calcium-binding domain profile. 476 511 IPR002048 GO:0005509
Bisa12g1717 522 Gene3D Phosphorylase Kinase; domain 1 76 130 - -
Bisa12g1717 522 ProSiteProfiles EF-hand calcium-binding domain profile. 434 469 IPR002048 GO:0005509
Bisa12g1717 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Bisa12g1717 522 Gene3D Transferase(Phosphotransferase) domain 1 131 322 - -
Bisa12g1717 522 Gene3D - 323 516 - -
Bisa12g1717 522 ProSitePatterns Protein kinases ATP-binding region signature. 18 43 IPR017441 GO:0005524
Bisa12g1717 522 PRINTS Recoverin family signature 406 427 - -
Bisa12g1717 522 PRINTS Recoverin family signature 496 516 - -
Bisa12g1717 522 PRINTS Recoverin family signature 430 449 - -
Bisa12g1717 522 Gene3D Phosphorylase Kinase; domain 1 2 71 - -
Bisa12g1717 522 SMART efh_1 438 466 IPR002048 GO:0005509
Bisa12g1717 522 SMART efh_1 402 430 IPR002048 GO:0005509
Bisa12g1717 522 SMART efh_1 480 508 IPR002048 GO:0005509
Bisa12g1717 522 Pfam Protein kinase domain 94 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1717 522 ProSiteProfiles Protein kinase domain profile. 12 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1717 522 SUPERFAMILY Protein kinase-like (PK-like) 5 324 IPR011009 -
Bisa12g1717 522 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 485 - -
Bisa12g1717 522 ProSitePatterns EF-hand calcium-binding domain. 447 459 IPR018247 -
Bisa12g1717 522 FunFam Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 3 127 - -
Bisa12g1717 522 ProSitePatterns EF-hand calcium-binding domain. 489 501 IPR018247 -
Bisa12g1717 522 Pfam EF-hand domain pair 437 506 IPR002048 GO:0005509
Bisa12g1717 522 CDD EFh 405 464 IPR002048 GO:0005509
Bisa12g1717 522 SMART serkin_6 12 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1717 522 FunFam Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase 131 321 - -
Bisa12g1717 522 Pfam EF hand 407 422 IPR002048 GO:0005509
Bisa12g1717 522 ProSitePatterns EF-hand calcium-binding domain. 411 423 IPR018247 -
Bisa12g1717 522 SUPERFAMILY EF-hand 347 512 IPR011992 -
Bisa12g1717 522 CDD STKc_CAMK 12 303 - -
Bisa12g1717 522 ProSiteProfiles EF-hand calcium-binding domain profile. 398 433 IPR002048 GO:0005509
Bisa12g1717 522 CDD EFh 439 506 IPR002048 GO:0005509
Bisa12g1717 522 FunFam calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 347 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1717 Bisa-ChrBisa12 33384962 33389209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1717 95 512 EF-hand Containing Proteins AT4G04720 35.629 1.26e-79 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMK1-DCAMKL Bisa12g1717 Pkinase 1.4e-56 CL0016