Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1714 ATGGCCTTACGAAGAGCTTTTGAAGATCTTCGAGTTCCCGTCAGTGTTCACTGGAGCCTCTCTGTACCTTTTGCTTTGTTTTCTGGTTTCTCTGATGCCTATGCCCGTTCTGTTTCTATTATATCTATGTATGTAGGAATGGCTTCTTCAAGTCCTAGTGGATCTGGTGCATTTGAATCACTGCCACCTCCACCTTCCTACATCCCTCCTGATGTTGTTCCTAGTAAAGTTTATGAGCCAGTGAAGAAGACATTAAATTCAAAACGTTTGCCTATGGATAGGCGTGGTATTGGATCTAAGGGCCAAAAGATACAGCTCTTGACTAACCACTTTAGAGTTGGTGTGGGCAAGAAAGATGGCTACTTCTATCAGTATAGTGTTGCCCTCTTTTACGAAGATGGACGCCCTGTGGAAGCTAAGGGTATCGGGAGAAGGGTCATAGACAAAGTTTATGAGACATACAGTACTGAACTACAAAGCAAGGACTTCGCATATGACGGAGAGAAAAGCTTATTTACTCTTGGTTCTCTCACACATAACAAGCTTGAGTTCACTGTGGTGCTGGACGACATATCATCAAACAAGGTTGGAAAGAATAGAAGCCCTGACAGCCCTGATGGAAGTGATAACAAGAGAATGAGGCGTCAATCTCAGTCCAAAACATTCAAGGTTGAGATCAGTTATGCTACTAAAATCCCGGTGAAAGCAATTGTAGATGCATTACGTGGGCAGGAATCTGATCACTTCCAGGAAGCATTGAGGGTTCTGGACATTATACTCAGACAGCATGCAGCAAAGCAGGGCTGTCTACTTGTTCGCCAATCTTTCTTCCATGACAATCCAAGGAATTACACTGATATTGGAGGTGGTGTTCAAGGTTGTCGCGGTTTTCATTCAAGCTTCCGAGCCACTCAAGGGGGACTGTCCCTAAACATTGATGTGTCAACAACAATGCTTCTAAGGCCTGGCCCAGTGTTGGAATTCCTTTGCATGAATCAAAATGTCAACCATCCAGGCTTAATTGATTGGACCAAGGCTAAAAGGATGCTGAAGAACCTGAGAATCAAGGCTAACAACATTGAGTACAAAATCACTGGATTGAGTGATAGACCCTGCAGAGATCAGACATTTTCATTAAGACAAGGAAGGGATGCAAATGGTGAAGTGCAGTCAATTGAAGTAACAGTTCGTGATTATTTTCAACACCATAAGCACATAAGATTGCAATATGCTGATTTTCCATGCATCAATGTTGGTAAACCAAAGCGCCCGTCTTATTTTCCAGTGGAGCTCTGCACCTTGGTCTCATTGCAACGTTACACCAAGGCAGTTACCAATTTGCAAAGAGCTGCGCTTGTGGAGAAGTCAAGGCAAAAGCCCCATGAGCGAATGGCAGCTTTGGCTGATTCACTAAGAAACAGCAGATACAGTAATGAGCCTATGCTTCGCTCTTCAGGAATCACCATTGACTCTGAGTTTACTCGAGTTGAGGGTCGTGTTTTGCCAGCCCCAATGCTTAGAGTTGGAAATGGGGAGGACTTTCTTCCTCGAAATGGGAGGTGGAATTTCAACAATAAGAAACTAGTTCAACCTGTGGATATTGTGCGATGGGCTATTGTAAACTTCTCAGCTCGTTGTGATAGTCGTTATCTTATCCAAGGCCTGAAAAGATGTGCAACAATGAAGGGGATTACCTTAAGTGATCCATTTCGTGTGTTTGAAGAGGATCAACACATGAGACGCCAACCAGCCCCTGCCAGGGTTGAGAGAATGTATGAAATTGTGAAGTCTAATTTGCCTGGGTTCCCCCAACTTCTTTTATGCATTCTTCCAGAGAGGAAGAATTCTGACATTTATGGTCCTTGGAAAAGGAGAAATCTAGCGGAGGAAGGAGTTGTCACACAATGTATTGCCCCAACAAAAATGAATGATCAGTACTTTACTAATGTTCTGTTGAAAATCAATGCCAAGCTTGGTGGGATGAATTCCTTTTTGGCAATGGAGAATGCACCTTCCATACCTTTAGTTTCTAGGGTACCCACCTTAATTCTTGGTATGGATGTCTCACATGGCTCTCCTGGTCGATCGGATGTGCCATCTATTGCTGCGGTTGTCAGCTCGAGGTGTTGGCCTTTAATTTCACGTTATAGAGCGTCAGTTCGTACTCAGTCGCCAAAAGTTGAGATGATTGCTAATCTGTTTAAGCCTATTTCTGATACTGAGGATGATGGTATTATCAGAGAGCTTCTTGTAGACTTCACTGCAACTTCAGGATCAAGGAAGCCTGAACATATTATCATTTTCAGGGATGGAGTGAGTGAATCTCAGTTCAATCAAGTCTTGAACATTGAGTTAGATCAAATCATTCAGGCATGCAAGCATCTTCAAGAAAATTGGGATCCAAAGTTCACTGTGATTGTTGCCCAGAAGAATCATCATACTAAGTTCTTCCAGGCCAATGCTCAAGAAAATGTTCCCCCTGGAACCGTCATTGATAACAGAATCTGTCACTCAAAGAACAATGACTTCTACATGTGTGCTCATGCTGGGATGATTGGGACGACACGGCCTACTCATTACCATGTTTTACATGATGAGATCGGGTTCTCAGCAGATGGTTTGCAAGAACTTGTGCATTCTCTATCTTATGTGTATCAGAGGAGCACAACAGCCATATCAGTAGTTGCTCCAATTTGCTATGCCCACTTGGCAGCTTCTCAGATGGCACAGTTTGTCAAGTTTGACGAACTTTCTGAGTCATCTTCCAGCCATGGTGGACTCACATCTGTTGGTGCAGATCACGTGCCAGAGTTACCCCGTCTTCACGAACAAGTCTGCAACTCCATGTTCTTCTGTTAG 2859 0.4351 MALRRAFEDLRVPVSVHWSLSVPFALFSGFSDAYARSVSIISMYVGMASSSPSGSGAFESLPPPPSYIPPDVVPSKVYEPVKKTLNSKRLPMDRRGIGSKGQKIQLLTNHFRVGVGKKDGYFYQYSVALFYEDGRPVEAKGIGRRVIDKVYETYSTELQSKDFAYDGEKSLFTLGSLTHNKLEFTVVLDDISSNKVGKNRSPDSPDGSDNKRMRRQSQSKTFKVEISYATKIPVKAIVDALRGQESDHFQEALRVLDIILRQHAAKQGCLLVRQSFFHDNPRNYTDIGGGVQGCRGFHSSFRATQGGLSLNIDVSTTMLLRPGPVLEFLCMNQNVNHPGLIDWTKAKRMLKNLRIKANNIEYKITGLSDRPCRDQTFSLRQGRDANGEVQSIEVTVRDYFQHHKHIRLQYADFPCINVGKPKRPSYFPVELCTLVSLQRYTKAVTNLQRAALVEKSRQKPHERMAALADSLRNSRYSNEPMLRSSGITIDSEFTRVEGRVLPAPMLRVGNGEDFLPRNGRWNFNNKKLVQPVDIVRWAIVNFSARCDSRYLIQGLKRCATMKGITLSDPFRVFEEDQHMRRQPAPARVERMYEIVKSNLPGFPQLLLCILPERKNSDIYGPWKRRNLAEEGVVTQCIAPTKMNDQYFTNVLLKINAKLGGMNSFLAMENAPSIPLVSRVPTLILGMDVSHGSPGRSDVPSIAAVVSSRCWPLISRYRASVRTQSPKVEMIANLFKPISDTEDDGIIRELLVDFTATSGSRKPEHIIIFRDGVSESQFNQVLNIELDQIIQACKHLQENWDPKFTVIVAQKNHHTKFFQANAQENVPPGTVIDNRICHSKNNDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADGLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQMAQFVKFDELSESSSSHGGLTSVGADHVPELPRLHEQVCNSMFFC 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1714 952 Gene3D paz domain 316 440 - -
Bisa12g1714 952 SMART Piwi_a_2 605 913 IPR003165 GO:0003676
Bisa12g1714 952 Gene3D - 500 666 - -
Bisa12g1714 952 ProSiteProfiles Piwi domain profile. 605 913 IPR003165 GO:0003676
Bisa12g1714 952 MobiDBLite consensus disorder prediction 202 219 - -
Bisa12g1714 952 MobiDBLite consensus disorder prediction 195 220 - -
Bisa12g1714 952 SUPERFAMILY Ribonuclease H-like 590 911 IPR012337 -
Bisa12g1714 952 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 86 915 - -
Bisa12g1714 952 SMART DUF1785_2 270 322 IPR014811 -
Bisa12g1714 952 FunFam Protein argonaute 3 673 952 - -
Bisa12g1714 952 Pfam PAZ domain 326 452 IPR003100 GO:0005515
Bisa12g1714 952 Pfam N-terminal domain of argonaute 102 260 IPR032474 -
Bisa12g1714 952 Pfam Piwi domain 606 913 IPR003165 GO:0003676
Bisa12g1714 952 CDD PAZ_argonaute_like 322 435 - -
Bisa12g1714 952 Pfam Argonaute linker 1 domain 272 318 IPR014811 -
Bisa12g1714 952 Gene3D - 672 952 IPR036397 GO:0003676
Bisa12g1714 952 SUPERFAMILY PAZ domain 317 476 IPR036085 GO:0005515
Bisa12g1714 952 CDD Piwi_ago-like 480 905 IPR045246 -
Bisa12g1714 952 ProSiteProfiles PAZ domain profile. 362 436 IPR003100 GO:0005515
Bisa12g1714 952 FunFam Protein argonaute 7 317 440 - -
Bisa12g1714 952 Pfam Argonaute linker 2 domain 462 507 IPR032472 -
Bisa12g1714 952 Coils Coil 778 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1714 Bisa-ChrBisa12 33239566 33249767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1714 94 952 Eukaryotic Initiation Factors Gene Family AT5G43810 36.151 4.99e-166 509