Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1712 ATGGGTGTTGTGGATTGGCTATTGAGACTGAAGGTAGCTAGTGATTGGTGGCGGGGGTTTGCTCAGTTGCTGTTGGGGATAGTTCTAGATGGTTGGCAGTTGTCAACATATTATGGTGGAGCATGTAAATTAGATGTTCTTGCTAATGTGGCTGATTCTAATGCTGCACTAACCTTTGGGGTGGCTGAGGAATTTAGGAAAAATCATTTGAGTTGTAGGGAGCAGGGAGGTGTGTTGCATGCCTATGAAGGAGGGAGGATTGAGTCCCTGAGCAGTAATGAACTCTCAAGAAAAGCCCTCTTGGAAATCCCAGGTCCTAACAAAGGATTTGACCATTCTCAGAGCCTGTTTGGTGTGCAGGAAAACTGGCAATGGAAAGGGAGAGGTAGAGTGAAAATGGCTTTAGCATTGATTGAGGTGAAGTGGAGTGAAGAAAAGGGGAAGAAGAGTGCAGTAGTGTTGGGTGAGAGGAAATTCCCTGAGAACACCCAGGAGTGGAAGTGTGGAACAACCAAGAGAAGCCAAGTACAATTGAAAATCATCAGGCTGAAAGCTGTTATTCTCATCATGGATATAGATCTTAGGTTACCTTCTGGAGAGCATGATAAGGAGGATGAAGAACCGAATACAATTGATAACATATTGGAGGGTGAAGAAAAGTTACATAATGGAGATCTAGAAGGTAGAAATATGGTTGGCACTGGTGTCGAGGTACATGCTCTAGATGGTGGAGATTTGAATTCACACACAGTGGATATGGTAATTTTTAAGGAGGATACAAATCTTGAGCCCCTTTCTGGCATGGAATTTGAGTCTCATGGGGAAGCTTATTCTTTCTACCAAGAATATGCTCGGTCAATGGGATTTAACACTGCAATACAAAATAGTCGCCGTTCAAAAACATCGAGAGAATTTATAGATGCAAAGTTTGCATGTTCCAGATATGGAACAAAACGAGAGTATGACAAATCATTCAATCGACCACGTGCCAGACAGAACAAACAAGATGCTGAAAATTCAACTGGTCGAAGATCTTGTTCAAAGACTGACTGTAAAGCAAGCATGCATGTAAAAAGAAGGTGTGATGGAAAATGGGTTATACATAGTTTTGTGAAGGAGCACAATCATGAGCTTTTACCAGCCCAGGCTGTTAGTGAGCAAACAAGAAAAATGTATGCTGCGATGGCTAGACAGTTTGCTGAATACAAAACTGTGGTTGGTCTCAAGAATGAGAAAAATCCATTTGATAAAGGTCGGAATTTGGGCCTGGAGTCAGGGGATGCCAAACTTTTGCTTGATTTTTTTGTACAGATGCAAAGTATGAATTCAAACTTCTTTTATGCAGTAGACCTTGGTGAGGATCAACGTCTGAAAAATTTTTTATGGATTGATGCTAAAAGTAGGTATGACTATATAAACTTTTGTGATGTAGTTTCTTTTGACACCACCTATGTTAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGAGTGAATCAGCACTATCAATTTATATTGCTTGGGTGTGCTTTGATATCAGATGAAAGTGCCACTACTTATTCTTGGCTAATGCGGACATGGCAGAAAGCAGTTGGTGGTCAAGTTCCAAAAGTGATCATTATTGACCACGACAAGATATTGAAGTCTGTTATTTTAGATGTCTTTCCTAATGCTCATCATTGCATGTGCTTATGGCACATATTGGGGAAGGTATCTGAAATTTTGGCTCATGTAATAAAGCGACATGATAATTTTATGGCAAAATTTGAAAAATGTATCTATAGGTCATGGACGAGTGATGAGTTTGAGAAGAGGTGGTGGAAAATTGTTGATAGGTTTGAACTCCGAGAAGATGAATGCATGCAGTCATTGTATGAAGATCGTAAGTTATGGGTGCCAACATTCATGAGGGATGTTTTCTTAGGTGGTATGTCTACTGTTCAGCGATCTGAAAGTGTGAACTCCTTCTTTGATAAATATGTTCATAAGAAGACCTCCGTGCAAGATTTTGTCAAACAGTATGAAGCAATCTTGCAAGACAGGTATGAAGAAGAAGCAAAAGCAGATTCTGATACTTGGAATAAAGTGGCAACATTAAAAACTCCTTCACCACTAGAGAAGAGTGTTGCAGGGAGTTACACAAATGCAGTATTCAAGAAGATCCAAGTTGAGGTTATTGGTGCAGTTGCTTGTCATCCTAAAGCTGAGAGACAGGATGATACTGGCATTACTTATAAGGTTCATGATATGGAAAAGAATCAAGACTTTACTGTTGTGTTGAATGAAATTAAATCAGAAGTGTCTTGCATATGTCGGTTATTTGAATATAGAGGTTTTCTATGTCGACACGCATTGATCGTTCTTCAATATTCTGGCCTTTCAGTGATCCCACCCCAGTACATTTTGAAAAGGTGGACTAGAGATGCAAAGGCTGGGCATATAATGGGAGAAGAATCTGAACATATGCTGGCTAGGGTGCAACGGCACAATAATTTATGTCAGCAAGCATTGAAGTTGAGTGAAGAGGGATCTCTGTCTCAAGACAGTTATAGTATTGCATTCCATGCACTACGTGAAGCATACAAAAGTTGTGTGAGTGTTAACAATTCTAGTAGGAGTCCTACTGATGTTGGCACATCGGCTGGTCATGGTCAGCTTTCCACTGAAGAAGATACCCAAAGTAGAAATATAGGCAAGACAAACAAAAAGAAGAATCCAACTAAAAAGAAAAAGCTGAACTCTGAGGCTGAAGTGATGGCTGTTGGGGCACAAGATAACTTGCAACAAATGGATAAATTCAACACAAGAGCAGCAACCTTTGATGGTTATTATGGCACTCAACAGAGTGTTCAGGGAATGTTGAACTTGATGGGACCAACACGTGATAATTACTATGGGAACCAACAGACAATTCAGGGGCTGGGACAATTAAGTTCCATACCAACGAGCCATGATGGTTATTATGGCACTCATCAGAGCATGCCTGGTCTGGCACAACTGGATTTTTTTCGGGCATCAGCAGGTTTCCCTTATGGCATTCGGGACGATCCTAATGTAAGACCAACACAGTTGCATGAGGATCCATCAAGACAGCCATGA 3102 0.4055 MGVVDWLLRLKVASDWWRGFAQLLLGIVLDGWQLSTYYGGACKLDVLANVADSNAALTFGVAEEFRKNHLSCREQGGVLHAYEGGRIESLSSNELSRKALLEIPGPNKGFDHSQSLFGVQENWQWKGRGRVKMALALIEVKWSEEKGKKSAVVLGERKFPENTQEWKCGTTKRSQVQLKIIRLKAVILIMDIDLRLPSGEHDKEDEEPNTIDNILEGEEKLHNGDLEGRNMVGTGVEVHALDGGDLNSHTVDMVIFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQNKQDAENSTGRRSCSKTDCKASMHVKRRCDGKWVIHSFVKEHNHELLPAQAVSEQTRKMYAAMARQFAEYKTVVGLKNEKNPFDKGRNLGLESGDAKLLLDFFVQMQSMNSNFFYAVDLGEDQRLKNFLWIDAKSRYDYINFCDVVSFDTTYVRNKYKMPLALFVGVNQHYQFILLGCALISDESATTYSWLMRTWQKAVGGQVPKVIIIDHDKILKSVILDVFPNAHHCMCLWHILGKVSEILAHVIKRHDNFMAKFEKCIYRSWTSDEFEKRWWKIVDRFELREDECMQSLYEDRKLWVPTFMRDVFLGGMSTVQRSESVNSFFDKYVHKKTSVQDFVKQYEAILQDRYEEEAKADSDTWNKVATLKTPSPLEKSVAGSYTNAVFKKIQVEVIGAVACHPKAERQDDTGITYKVHDMEKNQDFTVVLNEIKSEVSCICRLFEYRGFLCRHALIVLQYSGLSVIPPQYILKRWTRDAKAGHIMGEESEHMLARVQRHNNLCQQALKLSEEGSLSQDSYSIAFHALREAYKSCVSVNNSSRSPTDVGTSAGHGQLSTEEDTQSRNIGKTNKKKNPTKKKKLNSEAEVMAVGAQDNLQQMDKFNTRAATFDGYYGTQQSVQGMLNLMGPTRDNYYGNQQTIQGLGQLSSIPTSHDGYYGTHQSMPGLAQLDFFRASAGFPYGIRDDPNVRPTQLHEDPSRQP 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1712 1033 SMART 26again6 768 795 IPR006564 GO:0008270
Bisa12g1712 1033 Pfam MULE transposase domain 477 569 IPR018289 -
Bisa12g1712 1033 Pfam FAR1 DNA-binding domain 278 380 IPR004330 -
Bisa12g1712 1033 ProSiteProfiles Zinc finger SWIM-type profile. 757 793 IPR007527 GO:0008270
Bisa12g1712 1033 MobiDBLite consensus disorder prediction 869 914 - -
Bisa12g1712 1033 MobiDBLite consensus disorder prediction 1014 1033 - -
Bisa12g1712 1033 Pfam SWIM zinc finger 759 791 IPR007527 GO:0008270
Bisa12g1712 1033 MobiDBLite consensus disorder prediction 322 348 - -
Bisa12g1712 1033 MobiDBLite consensus disorder prediction 869 895 - -
Bisa12g1712 1033 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 257 866 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1712 Bisa-ChrBisa12 33201641 33211465 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bisa12g1712 FAR1 1.7e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1712 12 33201641 33211465 Bisa02g2451 02 61217637 61220809 CCT