Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1698 ATGGTGAACCTTACGGAATGGCAAAAGCAGCATATCGGAATGTTGTATTTGGATGATCGATTGGAAATTCTCAGGCAACAAATTGCAGATTATACTACAACATGTGAGGAACTCGTTGAGATGCACAAGACATTCTTCGCCCAGCAGGATCTTGCAGGAGTTAGGCTGGGAAATATGTACTGTGAGCCGTTGATGACTTCTGCTGGCCACAAAATAACGTCCAGACAGGGGTGGACTCCAACAACTGTGCAACTTCAAATTCCCGAGCATATCTTTGATCAGGGAAATGGAACTCCAAGCAAGCAAAAGATCAAGGTAATTACTGCAGAACTGAGCCAGCATGGCCAAATTTCTGAAACAAATGTCTATAATTGGTTTCAGAATAGGCGAGCTCGATCAAAAAGAAGGCGGCAAAATGTGGCACCAAATAACACTGAATCAGAAGTTGAGACTGAAGCGGAGTCGTCCAAAGCTAAGAAGACAGAACCCGAGGAGCTTCAGTCCCAACATAGTGCATCTACAAGGGCTGAAGATTTGTTCTTCCAGAATCATGAAGTATGCTCTGATTTGCACTACTTGAATCCAGAGTCCAGTAAACAAGAATCTATGTTCCCATCAGAGGGAAGTCTAAAACCTACTGGAAGTTTTGGTCAAATGTCTGTCTTTGATGGAATGCTATCAAGCTCGAAAGCTGTAAAGAATCCAGATCGGGGTTGTTGGACCTGTCATGAAATGGAAGCAAATTCATCCAATGAAAACCTTGGAACTTACAAAACCTGTTTTAGATTTCTGTATGGTAGAGTTGCTGAAACTTTGACTGGACATCTGAGTTTGAGATCATATTGTGAAGTTGGTTTTCTGCCTTCATTTCCGTTGAAGGGACAAAGTTCTCTTTGA 897 0.4225 MVNLTEWQKQHIGMLYLDDRLEILRQQIADYTTTCEELVEMHKTFFAQQDLAGVRLGNMYCEPLMTSAGHKITSRQGWTPTTVQLQIPEHIFDQGNGTPSKQKIKVITAELSQHGQISETNVYNWFQNRRARSKRRRQNVAPNNTESEVETEAESSKAKKTEPEELQSQHSASTRAEDLFFQNHEVCSDLHYLNPESSKQESMFPSEGSLKPTGSFGQMSVFDGMLSSSKAVKNPDRGCWTCHEMEANSSNENLGTYKTCFRFLYGRVAETLTGHLSLRSYCEVGFLPSFPLKGQSSL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1698 298 ProSiteProfiles 'Homeobox' domain profile. 81 136 IPR001356 GO:0003677
Bisa12g1698 298 Pfam Homeodomain 76 135 IPR001356 GO:0003677
Bisa12g1698 298 PANTHER WUSCHEL-RELATED HOMEOBOX 13 18 236 IPR044559 GO:0003700
Bisa12g1698 298 SUPERFAMILY Homeodomain-like 74 138 IPR009057 -
Bisa12g1698 298 Coils Coil 21 41 - -
Bisa12g1698 298 MobiDBLite consensus disorder prediction 150 166 - -
Bisa12g1698 298 CDD homeodomain 75 130 IPR001356 GO:0003677
Bisa12g1698 298 Gene3D - 78 141 - -
Bisa12g1698 298 SMART HOX_1 73 140 IPR001356 GO:0003677
Bisa12g1698 298 MobiDBLite consensus disorder prediction 131 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1698 Bisa-ChrBisa12 32613281 32616351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1698 18 194 Wox Gene Family AT4G35550 57.653 1.29e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bisa12g1698 Homeodomain 6e-13 CL0123