Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1697 ATGGCTGTGCAGTGCTCCTGTTTGTGCGAATTTGCGTCCCTCTCTAACTTAGGAAAGAGGGAGAGAGAGAAAGCGCAGAGAGCGATGGTGAACCTTACGGAATGGCAAAAGCAGCATATCGGAATGATGTATGTGAAGGTGATGACCGATGATCAATTGGAAATTCTCAGGCAACAAATTGCAGTTTATACTTCAATATGTGAGGAACTCGTTGAGATGCACAAGGCACTCACGGCTCAGCAAGATCTTGCAGGAGTTAGGCTGGGAAATATATACTGTGACCCGTTGATGACTTCAGCTGGCCACAAATTAACTTCCAGACAGAGGTGGACTCCAACACCTGTGCAACTTCAAATTCTCGAGCGTATCTTTGATGAGGGAAATGGAACTCCAAGCAAGCAAAAGATCAAGGAGATTGCTGCAGAACTGAGCCAGCATGGCCAAATTTCTGAAACAAATGTCTATAATTGGTTTCAAAATAGACGAGCTCGATCAAAAAGAAGGCAGCAAAATGTGGCACCAAATAACACTGAATCAGAAGTTGAGACTGAAGCCGAGTCGTCCAAAAATAAGAAGACAAAACCCGAGGAGCTTCAATCCCAACATAGTGCATCTACAAGGGCTGAAGATTTGTGCTTCCAGAATCATGAAGTATGCTCTGATTTGCACTACTTGAATCCAGAGTCCAGTAAACAAGAATCTATGTTCCCATCAGATGGAAGTCTAAAACCTCCTAAAAGTTTTGGCCAAATGTCTTCTTTTGATGGAATGCTATCAAACTCGAGGGATGGCTATATCACGGGAAAAATGCAAGTGCCAGGAAGCTACAATTTATACCAGCTACATGACGGGTTGACATTCATTGTAAATTCTGACAACGATGACTAG 888 0.4313 MAVQCSCLCEFASLSNLGKREREKAQRAMVNLTEWQKQHIGMMYVKVMTDDQLEILRQQIAVYTSICEELVEMHKALTAQQDLAGVRLGNIYCDPLMTSAGHKLTSRQRWTPTPVQLQILERIFDEGNGTPSKQKIKEIAAELSQHGQISETNVYNWFQNRRARSKRRQQNVAPNNTESEVETEAESSKNKKTKPEELQSQHSASTRAEDLCFQNHEVCSDLHYLNPESSKQESMFPSDGSLKPPKSFGQMSSFDGMLSNSRDGYITGKMQVPGSYNLYQLHDGLTFIVNSDNDD 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1697 295 Pfam Homeodomain 107 167 IPR001356 GO:0003677
Bisa12g1697 295 SUPERFAMILY Homeodomain-like 102 170 IPR009057 -
Bisa12g1697 295 MobiDBLite consensus disorder prediction 182 198 - -
Bisa12g1697 295 ProSiteProfiles 'Homeobox' domain profile. 103 168 IPR001356 GO:0003677
Bisa12g1697 295 SMART HOX_1 105 172 IPR001356 GO:0003677
Bisa12g1697 295 Gene3D - 109 173 - -
Bisa12g1697 295 CDD homeodomain 107 169 IPR001356 GO:0003677
Bisa12g1697 295 PANTHER WUSCHEL-RELATED HOMEOBOX 13 33 278 IPR044559 GO:0003700
Bisa12g1697 295 MobiDBLite consensus disorder prediction 165 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1697 Bisa-ChrBisa12 32572107 32575023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1697 43 279 Wox Gene Family AT4G35550 54.688 3.48e-85 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bisa12g1697 Homeodomain 3.3e-19 CL0123