Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1696 ATGCCGTCATCCTCCACTTCCCTTTCCCTCTTCTCTTTCTCTGTCTTTCTCTTCCTCTTCCTTCCATTACTCATAGCCCAACATCCTCCTCTTCCTCCTTCTCCTTCTCCGCCTCCTCCTTCCTCCTCTTCAGCTTGCAAGTTCACATTGTACCCAAAACTATGTCGTTCCATCCTCTCCGTGATCGGCTCCTCGCCGTCCGATCCCTACGGCTTCGGCAAGTTCTCCATCAAACAGAGCCTCAAGCAAGCCAAGAAACTCGCCAAGGTGTTTGAGGACTTCCTCAAACGCCACCATGCCTCCTCTCCCGAGGCCGCCGCCCTCTTCGACTGCCACGACCTCAACCTGCTCAACGTCGACTACCTCGAGACCGTCGTCGCCGCCCTTCAAACTGGCCCGGCCGACGCTGCCACGGCTACTACCGCCACGGCCAATGCTGAGCTAGCGGAGAGGGTCGAGAGCTACCTGAGTGCGGTGGCGACCAACCACTACACCTGTTACGATGGGCTGGTGGGGGCGAAGAGTAATATTGCGAAGGCGTTGGCGGTGCCGCTAATGAATGTGACCCAACTGTACAGTGTGTCGCTAGGGTTGGTGTCTGAGGCTCTGACCCAGAACCTGAAGAAGATGAAGACGCGCAAGCATGGCCTTCCTAGTCACTCTTACAGGGTCAGGCAGCCACTTGAGAAGCTCATTCAGGTTCTTCATGAGAAGTACAGTTGCAGAAAAGCATCTAATTGTACTACTAGGAGTGAAAGGATTCTCAAAGAAAGTGAAAGCAAAGGAATTCTATTGAATAACTTTGCAATTGTGAGCCAGTATGGGACAGACAACTTCACTTCCATTGGAGATGCCATTGCTGCTGCACCAGATGACCTGAAACCAGAAGATGGGTACTTTCTTGTGTATGTTAGAGAAGGATACTATGAAGAATACGTCATTGTTTCAAAACACAAGAAGAACATCTTGCTTATTGGAGATGGTATCAACCAGACTATCATCACAGGGAATCATAGTGTCATCGATGGTTGGACAACTTTCAATTCCTCCACCTTCGCTGTCTCAGGAGAAAGGTTCATAGCAGTGGATGTGACCTTCAGGAACACGGCCGGCCCAGAGAAGCACCAAGCCGTGGCGGTGAGGAACAATGCTGACCTCTCGACGTTTTACCGGTGTAGCTTTGAGGGGTACCAAGACACCCTCTATGCCCATTCCCTGAGACAATTCTACAGAGAATGTGACATCTACGGCACAGTGGACTTCATATTTGGCAATGCAGCAGTGGTATTCCAAGACTGCAAGATCTACGCTAGAAAACCACTTCCATTTCAAAAGAATGCCATCACAGCACAAGGCAGGACTGACCCAAACCAAAACACTGGGATCTCAATCCAGAATTGCACCATTCAAGCAGCACAAGACTTGGCTTCAGACCTGAACTCTACCACTATGACATACCTAGGAAGGCCATGGAAGGTGTATTCAAGAACTGTGTATATGGAGTCATATATTGGGAGTCTGATTGAACCTTCTGGATGGCTAGAGTGGAATGGGACTGTGGGGTTGGATACATTGTTTTTTGGAGAGTTCAAAAACTATGGACCTGGTGCTAGTACTAGCAGTAGGGTTCAATGGCCTGGGTACAATCTTTTGAATGCTACTCAGGCTTGGAACTTCACTGTGCTTAACTTTACACTGGGAGATACATGGCTTCCTGATACAGATATACCCTATTATGAAGGATTACTATATGTTTAG 1758 0.4898 MPSSSTSLSLFSFSVFLFLFLPLLIAQHPPLPPSPSPPPPSSSSACKFTLYPKLCRSILSVIGSSPSDPYGFGKFSIKQSLKQAKKLAKVFEDFLKRHHASSPEAAALFDCHDLNLLNVDYLETVVAALQTGPADAATATTATANAELAERVESYLSAVATNHYTCYDGLVGAKSNIAKALAVPLMNVTQLYSVSLGLVSEALTQNLKKMKTRKHGLPSHSYRVRQPLEKLIQVLHEKYSCRKASNCTTRSERILKESESKGILLNNFAIVSQYGTDNFTSIGDAIAAAPDDLKPEDGYFLVYVREGYYEEYVIVSKHKKNILLIGDGINQTIITGNHSVIDGWTTFNSSTFAVSGERFIAVDVTFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAVVFQDCKIYARKPLPFQKNAITAQGRTDPNQNTGISIQNCTIQAAQDLASDLNSTTMTYLGRPWKVYSRTVYMESYIGSLIEPSGWLEWNGTVGLDTLFFGEFKNYGPGASTSSRVQWPGYNLLNATQAWNFTVLNFTLGDTWLPDTDIPYYEGLLYV 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1696 585 ProSitePatterns Pectinesterase signature 2. 415 424 IPR033131 -
Bisa12g1696 585 Gene3D - 267 584 IPR012334 -
Bisa12g1696 585 NCBIfam pectinesterase inhibitor domain 12 199 IPR006501 GO:0004857
Bisa12g1696 585 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 202 IPR035513 -
Bisa12g1696 585 SMART PMEI_2 37 198 IPR006501 GO:0004857
Bisa12g1696 585 CDD PMEI-like_3 45 201 - -
Bisa12g1696 585 Pfam Plant invertase/pectin methylesterase inhibitor 43 197 IPR006501 GO:0004857
Bisa12g1696 585 PANTHER PECTINESTERASE 21 572 - -
Bisa12g1696 585 SUPERFAMILY Pectin lyase-like 266 581 IPR011050 -
Bisa12g1696 585 FunFam Pectinesterase 264 582 - -
Bisa12g1696 585 Pfam Pectinesterase 269 567 IPR000070 GO:0030599|GO:0042545
Bisa12g1696 585 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 200 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1696 Bisa-ChrBisa12 32515157 32524629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1696 13 583 Carbohydrate Esterase AT3G10720 56.911 0.0 689