Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1671 ATGGCAACTTCAATTTCAACTCTTCAAAATATCGAAGCCTCAACTTCAAAACAACAACAGGCACAAAATCCTACAATGACTAAACACCAAACAGGGACACATTCACTATTCTACATTCCAGAGAGCAAAAAGATAGGCCAAACAGAAGCACCACAACCTGAGATGAAGGAAGAATTCGCAAACCCACTTTGCTCAATGTGCAAGAACATGAGACCGAAAGTCAAATCGCGAAGAGACTACAGTTATGTAGAGCTTTACATAGCCACAGAGGGATTTTCCCAGAAGAATTTTCTATCAGAAGGTGGTTTTGGATCGGTGTACAAAGGACAGATAGATGGAATGACAATTGCAGTGAAACAACACAAGTGCGCAAGCCTCCAAGGAGAGAAGGAGTTTAAGTTTGAAGTTAATCTTCTTAGCAAAGCGAGACATGAGAATGTGGTCATGCTGCTAGGGTCATGCTCAGAAGGAAATAATAGGCTTCTTGTTTATGAATACATATGCAACGACTCGTTGGAACGACATCTATCACAACACTCTTGTGCTCCTCTTAGCTGGGAAGATAGGATTAAAGTGGCAATTGGATGTGCCAAAGGCTTACTATATTTGCATGAGAATAACATCATACACAGAGACGTGAGACCAAATAATATTCTCATAACACATGATCATCAACCACTGCTAGGAGACTTTGGGTTGGCGAGAAGTCAACATCGAGACTCCATACACTCGACAGATGTTGTGGGGACATTGGGATATATGGCACCAGAATATGCAGAATATGGCAATGTGTCTACCAAGATGGATGTGTATTCTTTTGGGGTAACCCTACTGGAGCTGATTACAGGAATGAGGACTACAGACCAAAGACTTGGGGGAAGAAGCCTTGTGGGATGGGCAAGACCACTACTAAGAGAGAAGAATTATCCAGATTTAATTGACGAAAGGATAATGAATTCTCATGATTGCCATCAACTATTTTGGGTGGTTCTAATAGCAGAAAAATGCTTAAGCAGAGACCCTCATAAGAGATTAAATATGGCTGCAGTGGTCAATGCCTTGAATCCCATAGTGGAGGGCCAAGTATGTGGAATCACAATCAGAGATAGCTCTCCAGTGAGGTCAGACTCATTCTACACCATATTAGACGATGATGGTGAATCCTCAGAAGATGAAATGAACAAGTCAAAAGGCGAGTCAGAAAGTCATAATAGAGAATCCACATTAAGTAGTAGCAATATGAGTCAGATCATTTTAGGACTCCGAATCACTCCTTGCCCTTCGTTGGACATCACTCCCTCAGGTACGTCAAGTACAGTTGGTAAGGCTCAAGACCAATCAATTATGGACATGCAAGAGCAAAATGAAATTAAAGTCCTGGAATAA 1386 0.4141 MATSISTLQNIEASTSKQQQAQNPTMTKHQTGTHSLFYIPESKKIGQTEAPQPEMKEEFANPLCSMCKNMRPKVKSRRDYSYVELYIATEGFSQKNFLSEGGFGSVYKGQIDGMTIAVKQHKCASLQGEKEFKFEVNLLSKARHENVVMLLGSCSEGNNRLLVYEYICNDSLERHLSQHSCAPLSWEDRIKVAIGCAKGLLYLHENNIIHRDVRPNNILITHDHQPLLGDFGLARSQHRDSIHSTDVVGTLGYMAPEYAEYGNVSTKMDVYSFGVTLLELITGMRTTDQRLGGRSLVGWARPLLREKNYPDLIDERIMNSHDCHQLFWVVLIAEKCLSRDPHKRLNMAAVVNALNPIVEGQVCGITIRDSSPVRSDSFYTILDDDGESSEDEMNKSKGESESHNRESTLSSSNMSQIILGLRITPCPSLDITPSGTSSTVGKAQDQSIMDMQEQNEIKVLE 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1671 461 Gene3D Phosphorylase Kinase; domain 1 64 166 - -
Bisa12g1671 461 MobiDBLite consensus disorder prediction 1 31 - -
Bisa12g1671 461 PANTHER OS01G0750732 PROTEIN 15 388 - -
Bisa12g1671 461 MobiDBLite consensus disorder prediction 430 453 - -
Bisa12g1671 461 Gene3D Transferase(Phosphotransferase) domain 1 168 366 - -
Bisa12g1671 461 ProSiteProfiles Protein kinase domain profile. 92 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1671 461 MobiDBLite consensus disorder prediction 390 404 - -
Bisa12g1671 461 SMART tyrkin_6 92 354 IPR020635 GO:0004713|GO:0006468
Bisa12g1671 461 ProSitePatterns Tyrosine protein kinases specific active-site signature. 208 220 IPR008266 GO:0004672|GO:0006468
Bisa12g1671 461 FunFam Proline-rich receptor-like protein kinase PERK8 54 166 - -
Bisa12g1671 461 MobiDBLite consensus disorder prediction 378 412 - -
Bisa12g1671 461 Pfam Protein tyrosine and serine/threonine kinase 95 354 IPR001245 GO:0004672|GO:0006468
Bisa12g1671 461 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 167 369 - -
Bisa12g1671 461 MobiDBLite consensus disorder prediction 430 461 - -
Bisa12g1671 461 SUPERFAMILY Protein kinase-like (PK-like) 77 362 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1671 Bisa-ChrBisa12 31467736 31473349 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1671 77 359 Trihelix Transcription Factor Family AT5G38560 46.622 2.09e-76 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Bisa12g1671 PK_Tyr_Ser-Thr 7.5e-47 CL0016