Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1654 ATGGATCATTCTCCCTCTGAAGCCTCGAGCATCTCAGGAGGATCTAAAGGCAATTCTTGCGGAGAGGTTGCAGAAAACCAGAAGATGAAGATGGTGAAACTTTCGAACAACGATTCTATTCAAGGGTCAAAGATTGAGTTTGATTTTTTCAATTCCCGCCTGGGAGCCCTCGGTTCGTCTTCTATGGCCAACATCAACAATGAAGACAAAGATGAAGACAAAGATCATCATAATCATCATCAACATAATGACAATACACAAAGGATTTTCTGCTGCAACTTCTGCAAAAGGGAGTTTTCTTCCTCACAAGCCTTGGGAGGGCACCAAAACGCACACAAACAAGAGCGAGCACTCGCAAAACAACGTCAAGGCATTGTTGCTGACCACTTTGGTGCTTTAGGGCACCCTCACCCTCATACTCACTCCTCGCAATTTTTTCCTTATTATAATAATTACCCTAATTATTTTCCAAGCCCTCTAGTTGATTATAGGTCTTTCAATTATAATAGAGCTCTTGGGGTTAGAATGGAGCCCATGATTCGCCAGCCTTCTTATCATAACCCCAATTGGAGTTCAATGTCAAGCTTTAGGTTTAGGCATGGTCAAGCCCTGGATAGGCTTGAAACTTCAAAGCTTGAGGAAACTAGTAATGCCCCACTCACTCGCCAATTTGGTCATAATTCTTCTTCTTCAACTACTATTGGTGACCATTATGTCAAGTACATGCCAGAAGAAGCTTCCAAAGATGGTGATGATGACAATGGTGATGATAATCCTGATACTTCGGGTCTTGATTTGTCGCTTAAGCTTTAA 813 0.4207 MDHSPSEASSISGGSKGNSCGEVAENQKMKMVKLSNNDSIQGSKIEFDFFNSRLGALGSSSMANINNEDKDEDKDHHNHHQHNDNTQRIFCCNFCKREFSSSQALGGHQNAHKQERALAKQRQGIVADHFGALGHPHPHTHSSQFFPYYNNYPNYFPSPLVDYRSFNYNRALGVRMEPMIRQPSYHNPNWSSMSSFRFRHGQALDRLETSKLEETSNAPLTRQFGHNSSSSTTIGDHYVKYMPEEASKDGDDDNGDDNPDTSGLDLSLKL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1654 270 MobiDBLite consensus disorder prediction 213 236 - -
Bisa12g1654 270 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 3 270 IPR044246 GO:0009788
Bisa12g1654 270 MobiDBLite consensus disorder prediction 1 22 - -
Bisa12g1654 270 MobiDBLite consensus disorder prediction 66 83 - -
Bisa12g1654 270 ProSitePatterns Zinc finger C2H2 type domain signature. 91 112 IPR013087 -
Bisa12g1654 270 MobiDBLite consensus disorder prediction 61 83 - -
Bisa12g1654 270 ProSiteProfiles Zinc finger C2H2 type domain profile. 90 117 IPR013087 -
Bisa12g1654 270 Gene3D Classic Zinc Finger 66 129 - -
Bisa12g1654 270 MobiDBLite consensus disorder prediction 213 270 - -
Bisa12g1654 270 Pfam C2H2-type zinc finger 90 114 - -
Bisa12g1654 270 SUPERFAMILY beta-beta-alpha zinc fingers 87 118 IPR036236 -
Bisa12g1654 270 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1654 Bisa-ChrBisa12 31024228 31025681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1654 65 193 C2H2 Transcription Factor Family AT5G25160 34.839 1.42e-15 72.4