Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1653 ATGAAGAAGAAGCTCGATACGCGTTTTCCCGCTGCTCGGATTAAAAAGATCATGCAAGCAGATGAAGATGTTGGGAAGATTGCACTAGCAGTGCCTGTTTTAGTTTCTAAAGCTCTAGAGCTGTTTCTGCAAGATCTTTGTGACCGTACTTATGAAATAACTCTTCAAAGAGGAGCAAAGACCATGAGTGCGTTGCATTTAAAACACTGTGTACAAAGCTATAATGTCTTTGATTTTCTGAGGGATGTCGTCAGCAGGGTTCCTGATTATGGTCATGGACATGGCCATGGCCATTCTGAGGCTGGTTCTGATGATCGAGTCCTTCCAAGAAGAAGGAAAGCTGCGAATGATGATTACAATGACAGTGATGATGACTCCAAGAGGAGCAAAATGCATGAGTTGAGCCACACTGGTGGTACTGGTCGGGGAAGGGGCCGAGGTAGAGGAAGAGGCCGTGGTCGAGGGGCTCGAAACGTGGAGAGAGAGAGAGAAAGAGAGACCCATCATCATGAGGTTGAATCCGAGCCTTGCACTTCTGTTCAGAACAGCAGCAATCCTAGTACAAATGTGGCAATGGATAATGGCTCAGAGTCAAAGGAGTTACCAAAGGAGAATAATGCAGTTCCTAACGAAGGTGTTCAGTCCCTCCGTAACATTGATCTGAATGCCAACCTGAACGAAAATGAGGACAAAAATGCCAGCACCATAGTAGCTCAGGCCCCTGTGCGTGATCCTCCAAAAGCTGAGACCAAGCATGAAGAAATCCCAGGCTGGTCTCTTTCTGATGTGGACAAGATGGCCATTGACACTATGCAGCTTGCCCACCTTGGTAGACAGATAGAAGATGATGAGGAAGATTATGATGAGGAAGGGTAG 876 0.4658 MKKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSALHLKHCVQSYNVFDFLRDVVSRVPDYGHGHGHGHSEAGSDDRVLPRRRKAANDDYNDSDDDSKRSKMHELSHTGGTGRGRGRGRGRGRGRGARNVERERERETHHHEVESEPCTSVQNSSNPSTNVAMDNGSESKELPKENNAVPNEGVQSLRNIDLNANLNENEDKNASTIVAQAPVRDPPKAETKHEEIPGWSLSDVDKMAIDTMQLAHLGRQIEDDEEDYDEEG 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1653 291 MobiDBLite consensus disorder prediction 153 175 - -
Bisa12g1653 291 MobiDBLite consensus disorder prediction 176 195 - -
Bisa12g1653 291 SUPERFAMILY Histone-fold 3 90 IPR009072 GO:0046982
Bisa12g1653 291 MobiDBLite consensus disorder prediction 115 213 - -
Bisa12g1653 291 MobiDBLite consensus disorder prediction 229 256 - -
Bisa12g1653 291 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Bisa12g1653 291 MobiDBLite consensus disorder prediction 115 139 - -
Bisa12g1653 291 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Bisa12g1653 291 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 127 - -
Bisa12g1653 291 FunFam dr1-associated corepressor homolog 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1653 Bisa-ChrBisa12 30948018 30952278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1653 1 280 CCAAT-HAP5 Transcription Factor Family AT3G12480 50.168 5.18e-80 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bisa12g1653 CBFD_NFYB_HMF 2.7e-19 CL0012