Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1610 ATGGCTTCCAATATTAAGCAAGAAGCAGAAGCCTACAAAGTTGAAGAAGAAACTGAAGATGAAGAAGATGATGACGAAGAGCCCGAAGGCTGGGACGACTGGAACGGGGATGATGAGGAAGGAGAGGAGGGAGGCTCGGAATCGGATTTGCTGTGTCTGTTCTGTGATTCTAAGTACAGTTCGTGCGATTCCTTTTTTAAGCATTGCGCCTTAGTTCACCACTTTGATTTTCATGGCATTAGGGAAGCTCTGAATTTGGATTTTTATGGCTCCTTCAAGCTCATTAACTACATTCGCTCTCAGGTTGCAGAGAACAAGTGTTGGAACTGTGGATTCACATGTCAGTCCAACCAAGACCTACAGCATCATTTGCATGACATAATAAACCTCGAGGATATTAAGCTTCTATGGAATGATGATAGGTATCTACAACCTTTCATACAAGATGATTCACTATTACACGGTTTTGATGAATCTGAAGAAGGTGAGGATGAGCAGACTACACCAATGAATGTGGATGAAGTTGTGATGGATTTGAAGAATTCTGAAGAGATTTTTGGCTGTGATCAAAATACTATGGAACAGGTGGTTGCTAGCGATGATAAATATAATATCTATAGAATAAAGGAGACTGCTTCTGTTTCTGATATTCATATAAATGGTGCTAGTTCATCAGACAAGGATCTTATTAACAATGACTCAAGAGGATATGTTTCATCAAATGACAAGAGTCAAGGAGGACATTTGATGGCTAACACTTCAAGCCGTCTTGCAAAGCACATCATGAAGGTTAATGAAAATTATTTTGGGTCTTATAGTTCATTTGGCATTCATCGAGAAATGCTTAGTGATAAGGTGAGAATGGATGCTTATGGAAAAGCTATTTTGAAGAACCCCTCTCTCCTACGCGGTGCTGTAGTCATGGATGTAGGCTGTGGAACTGGAATCCTAAGCCTATTTGCAGCTCAAGCAGGGGCTTCAAGGGTGATTGCAATTGAGGCTAGTGCCAAGATGGCAGCTGTGGCATCTCAGATTGCAAATGATAATGGTCTTTTGCGTAGTAAAAGCCAAAGTAAAGGTGATGGCCCCCAAAAGGGAGTTATAGAAGTAGTTCAGGGTATGGTTGAAGAAATTGAGAAAAATGTTAATCTTGAGCCTCACAGTGTTGATGTATTATTAAGTGAATGGATGGGATATTGCCTGCTGTATGAGTCCATGCTCAGCTCAGTCCTCTATGCACGGGACCGGTGGTTGAAGCCTGGAGGAGCTATTCTTCCTGATACTGCAACCATTTTTGTTGCAGGATTTGGAAAAGGAGGTACAAGTCTTCCTTTTTGGGAAAATGTGTCTGGTTTTGATATGTCTTGCATTGGCAAGGAGTTGGTCAATGATGCTGCCCAAGTCCCAATTGTTGATGTTTTGGACTATCAAGATTTGGTTACCAGTTCCGAGATTCTTCAGACCTTTGACTTGGCAACTATGAAGCCTAATCAAGTGGATTTCACCTCAACTGCTACTTTGGAGCCAAAGTTGAATGCTACAGAAAACAACATAAAACATTTAGATTCAAGAACGTGTTGCTGGTGTTACGGAGTTGTCCTGTGGTTTGAAACTGGATTTACAAGCAGGTTCTGCCAAGAAACACCGGCTGTGTTATCGACATCTCCATACACGCCAAAATCACATTGGTCTCAAACAATCTTAACCTTCCTAGAACCCATTGCCATGGGATCTGAAACAGCTATTGGAGGCAAACTAGCAGCAATTGGTACTGATGCTTATCCTGCTGCGAAGATTGATCTGCGAATTAGCATTGTTCGATCTACAGAGCATCGCAGCATTGACATTTCCTTAGAAGCAGTTGGGGTGGGCCCTGATGGGCGGAGGCACAGTTGGCCAGCACAATTATTTTCTCTGCAGTAG 1923 0.4217 MASNIKQEAEAYKVEEETEDEEDDDEEPEGWDDWNGDDEEGEEGGSESDLLCLFCDSKYSSCDSFFKHCALVHHFDFHGIREALNLDFYGSFKLINYIRSQVAENKCWNCGFTCQSNQDLQHHLHDIINLEDIKLLWNDDRYLQPFIQDDSLLHGFDESEEGEDEQTTPMNVDEVVMDLKNSEEIFGCDQNTMEQVVASDDKYNIYRIKETASVSDIHINGASSSDKDLINNDSRGYVSSNDKSQGGHLMANTSSRLAKHIMKVNENYFGSYSSFGIHREMLSDKVRMDAYGKAILKNPSLLRGAVVMDVGCGTGILSLFAAQAGASRVIAIEASAKMAAVASQIANDNGLLRSKSQSKGDGPQKGVIEVVQGMVEEIEKNVNLEPHSVDVLLSEWMGYCLLYESMLSSVLYARDRWLKPGGAILPDTATIFVAGFGKGGTSLPFWENVSGFDMSCIGKELVNDAAQVPIVDVLDYQDLVTSSEILQTFDLATMKPNQVDFTSTATLEPKLNATENNIKHLDSRTCCWCYGVVLWFETGFTSRFCQETPAVLSTSPYTPKSHWSQTILTFLEPIAMGSETAIGGKLAAIGTDAYPAAKIDLRISIVRSTEHRSIDISLEAVGVGPDGRRHSWPAQLFSLQ 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1610 640 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 265 597 IPR025799 GO:0016274|GO:0018216
Bisa12g1610 640 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 53 620 IPR025799 GO:0016274|GO:0018216
Bisa12g1610 640 Gene3D - 428 629 - -
Bisa12g1610 640 Pfam C2H2 type zinc-finger (2 copies) 52 126 IPR041661 -
Bisa12g1610 640 Gene3D Vaccinia Virus protein VP39 257 426 IPR029063 -
Bisa12g1610 640 MobiDBLite consensus disorder prediction 14 45 - -
Bisa12g1610 640 CDD AdoMet_MTases 307 425 - -
Bisa12g1610 640 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 271 586 IPR029063 -
Bisa12g1610 640 FunFam Protein arginine N-methyltransferase 6 261 426 - -
Bisa12g1610 640 MobiDBLite consensus disorder prediction 1 45 - -
Bisa12g1610 640 SUPERFAMILY beta-beta-alpha zinc fingers 27 168 IPR036236 -
Bisa12g1610 640 Pfam Methyltransferase domain 307 422 IPR041698 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1610 Bisa-ChrBisa12 29996536 30001413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1610 2 639 C2H2 Transcription Factor Family AT3G12270 53.467 0.0 650