Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1603 ATGCCGAGCTTCGATTCTCAAATACCCATATCCATTGCGCGCTATGCAGAGGGAAGCACAATTGATTCTTTTCGTGTTTCTGATTTTGGAGCATTTGATCAATCAGTTGGATATTGCGTAGAGGAGGCTGTTGACCTAAGTGTATCTCAAAGTACCCAGACAATTTCCCCTGGTCCCGATCACACAGGTACTTCTGATAAGTTTCCAACTTTGCTTGAAAAAGCCCCATCGACCAAGCAAGCAGGTTCACTAAATTTGCAATCACAAAAGTTCCAATCATCTAATCTAGTAACCATATCTGGTAGCAATACTGACAATCAGGAAGAGTCTACCATGGCTGATGCTAGTCCTAGGACTGATATTTCTACAGATGTTGATACTGATGATAGGAATCAGCAGTATGACAGAAGTCAATCCATTGCTGCTGTGGCTTCTGACTCCAGTGACAGATCAAAGGATAAATCAGATCAGAAGACTCTTCGCAGGCTAGCTCAGAATCGTGAGGCTGCAAGAAAGAGCCGGCTGAGAAAGAAAGCCTACGTCCAACAGTTGGAAACCAGTCGTTTGAAGTTGACTCAACTAGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGAATATTCATATCAAGCTCAGGCGATCAAACACATTCAGTGAATGGAAATGGGGCCATGGCATTTGATGTAGAGTATGCGAGGTGGCTGGAAGAGCATAATCGCCATATTAGTGAGCTAAGAGCAGCTGTAAATGCTCATGCAAGTGATACAGAACTTCGCATGATTGTTGATAGCATATTGGCACACTATGATGATCTTTTTAGGCTGAAGGGAATTGCGGCTAAGGCTGATGTTTTCCATTTGTTGTCTGGCATGTGGATAACACCTGCAGAGAGGTGTTTTCTATGGCTTGGTGGTTTTCGATCATCTGAACTCCTCAAGCTCCTGGTAACTCAATTGGAACCTCTTACAGAGCAGCAGCTGGTTGGCATTACCAACTTGCAGCAATCCTCTCAACAGGCAGAAGATGCATTATCTCAGGGTATGGATGCATTGCAACAGTCCCTAGCTGAGACGTTGTCTAGTGGATCTCTTGGCTCATCTGGTTCATCAGGGAATGTGGCAAATTACATGGGCCAAATGGCTATGGCCATGGGTAAGCTAGGGACACTTGAGGGTTTTATTCGACAGGCTGACAATCTGCGGCAGCAAACACTGCAACAAATGCACCGTATATTGACAACACGCCAATCGGCTCGTGCGCTTCTTGCAATACATGACTACTACTCTCGGCTGCGTGCTCTTAGTTCCCTCTGGCTGGCCCGCCCTAGAGAATGA 1332 0.458 MPSFDSQIPISIARYAEGSTIDSFRVSDFGAFDQSVGYCVEEAVDLSVSQSTQTISPGPDHTGTSDKFPTLLEKAPSTKQAGSLNLQSQKFQSSNLVTISGSNTDNQEESTMADASPRTDISTDVDTDDRNQQYDRSQSIAAVASDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLETSRLKLTQLEQELQRARQQGIFISSSGDQTHSVNGNGAMAFDVEYARWLEEHNRHISELRAAVNAHASDTELRMIVDSILAHYDDLFRLKGIAAKADVFHLLSGMWITPAERCFLWLGGFRSSELLKLLVTQLEPLTEQQLVGITNLQQSSQQAEDALSQGMDALQQSLAETLSSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYYSRLRALSSLWLARPRE 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1603 443 Coils Coil 177 204 - -
Bisa12g1603 443 MobiDBLite consensus disorder prediction 98 120 - -
Bisa12g1603 443 ProSiteProfiles DOG1 domain profile. 223 440 IPR025422 GO:0006351|GO:0043565
Bisa12g1603 443 CDD bZIP_HBP1b-like 158 210 - -
Bisa12g1603 443 FunFam BZIP family transcription factor 157 206 - -
Bisa12g1603 443 Pfam Seed dormancy control 240 315 IPR025422 GO:0006351|GO:0043565
Bisa12g1603 443 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 156 200 IPR004827 GO:0003700|GO:0006355
Bisa12g1603 443 Pfam bZIP transcription factor 158 198 IPR004827 GO:0003700|GO:0006355
Bisa12g1603 443 Gene3D - 157 209 - -
Bisa12g1603 443 PANTHER TRANSCRIPTION FACTOR TGA9 85 443 - -
Bisa12g1603 443 SMART brlzneu 154 217 IPR004827 GO:0003700|GO:0006355
Bisa12g1603 443 SUPERFAMILY Leucine zipper domain 158 201 IPR046347 GO:0003700|GO:0006355
Bisa12g1603 443 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 161 176 IPR004827 GO:0003700|GO:0006355
Bisa12g1603 443 MobiDBLite consensus disorder prediction 50 70 - -
Bisa12g1603 443 MobiDBLite consensus disorder prediction 98 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1603 Bisa-ChrBisa12 29879821 29902757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1603 112 443 bZIP Transcription Factor Family AT3G12250 79.518 0.0 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bisa12g1603 DOG1 6.5e-32 No_clan