Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1587 ATGTCCTCACACACATCCTTCTCCACATCGTACATAATCCCTTCCTTTGCTGCATCTTCTTTCACATTCACCATACAGATCTTCCCTCTCTATCCCACGACGTCGATTGCGTCTCTTCTGAATCTCCCATCCTTTAGAGCTTCATTTGTAAATCACACTTCTCCAACGATTGAGAGACGTCGCTTGAGTATTGGGTCTCGACCCCGCTGGCCACGTAGATCAAGCCTCGAGATGCACTTAAGGCACACCAACGGATACGTGGTGGAGGGGTGGGTACGACAGCAACGAAGGGAGGTTGTGCTAATTGGAAGAGATGAGGTCGAAGTTGAAGAAGTGACTGGAATTGGAAGGTATATAATGGCCAATGGTGATGGTGGTGGGTGCATATATTGTGGTGGTGAGCTTCCTAGCGGCCTTCCCACATCAATATTAAACCTTGTAGTATGGGGTTGCCTCACTATGGAAGACAAACAAGACCATAACCGTAATAACCATAACCATAACCACTCAGCTCTGATCCCCTCAACCGCCAAAGAGGAATCACCGAGAAAAACTGTTATCGGCGGAGGCGGCGGCGGCGGCGATAGGCTGAAGCGAGATGAGTGGAGCGAAGGAGCGGTGTCGACGCTTCTGGAGGCGTACGAAGCCAAATGGATACTCCGAAACAGAGCCAAGCTCAAAGGCCACGACTGGGAGGACGTGGCCAGGCACGTGTCGTCACGCGCCAATTCCTCCAAGTCGCCGAAGACCCAGACGCAGTGCAAGAACAAGATCGAATCCATGAAGAAACGCTACCGTTCTGAGTCCGCCACAGGGGACGCCGCCTCTTCTTGGCCGTTGTATTCGCGTCTCGATCTTCTGCTACGTGGCACTGGACCGCCTCCATCCTCCGTGGCGCCGCCGCCACCGCCGCCGCCTCATGCGGCTGCGGCGGTTCCGTCTGGTTTGCTATTGTTGGAGTCGCCGTTGACTGTGTCCTCTCAGCCTCCTCATCAACAATTACCACTACCACAACCTCCGGCGGCGGCGGCTGCTGCAGTTGTTCCTCCACCACTTGCCATTAATGCACAGAACTCACATGGATCCAATGGTGTTGATAGGTTACCCAAGGAAGATATGTTGGGAACAAACAAATCATCAGAGCAAGTGTCGAACAAGAACAACAACGACAATGCAATTGTGGAGACAGACAGCAGCACCCCAGCACTGTACAGCCACTCAAAGGACCCTCCAACCAACAAGAGGAAGATGAAGATGGTGAAGAAGAAGAAGAGAATGAGGAGCAGAGAAGAGAACAGCAGCAACAACCATGACAACAACAACAAGAAGAATGGGAACATGGAGATTGCAGAGAGCATAAGGTGGCTGGCAGAGGTGGTGGTGAGGTCAGAGCAGGCCAGAATGGAGACCATGAAGGAGATTGAGAGGATGAGGGCTGAAGCAGAGGCCAAGAGAGGAGAAATGGACCTCAAGAGGACTGAGATCATTGCCAACACACAGCTAGAAATTGCTAGGATCTTTGCAAGTGTCAATAACAAAGGTGTTGATTCTTCACTCAGAATTGGTAGGAGTTAG 1575 0.5162 MSSHTSFSTSYIIPSFAASSFTFTIQIFPLYPTTSIASLLNLPSFRASFVNHTSPTIERRRLSIGSRPRWPRRSSLEMHLRHTNGYVVEGWVRQQRREVVLIGRDEVEVEEVTGIGRYIMANGDGGGCIYCGGELPSGLPTSILNLVVWGCLTMEDKQDHNRNNHNHNHSALIPSTAKEESPRKTVIGGGGGGGDRLKRDEWSEGAVSTLLEAYEAKWILRNRAKLKGHDWEDVARHVSSRANSSKSPKTQTQCKNKIESMKKRYRSESATGDAASSWPLYSRLDLLLRGTGPPPSSVAPPPPPPPHAAAAVPSGLLLLESPLTVSSQPPHQQLPLPQPPAAAAAAVVPPPLAINAQNSHGSNGVDRLPKEDMLGTNKSSEQVSNKNNNDNAIVETDSSTPALYSHSKDPPTNKRKMKMVKKKKRMRSREENSSNNHDNNNKKNGNMEIAESIRWLAEVVVRSEQARMETMKEIERMRAEAEAKRGEMDLKRTEIIANTQLEIARIFASVNNKGVDSSLRIGRS 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1587 524 MobiDBLite consensus disorder prediction 294 310 - -
Bisa12g1587 524 MobiDBLite consensus disorder prediction 240 255 - -
Bisa12g1587 524 Coils Coil 460 494 - -
Bisa12g1587 524 MobiDBLite consensus disorder prediction 375 407 - -
Bisa12g1587 524 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 170 510 IPR044823 -
Bisa12g1587 524 MobiDBLite consensus disorder prediction 289 311 - -
Bisa12g1587 524 MobiDBLite consensus disorder prediction 165 199 - -
Bisa12g1587 524 Gene3D - 202 267 - -
Bisa12g1587 524 MobiDBLite consensus disorder prediction 353 446 - -
Bisa12g1587 524 MobiDBLite consensus disorder prediction 237 256 - -
Bisa12g1587 524 FunFam Trihelix transcription factor ASIL2 202 267 - -
Bisa12g1587 524 Pfam Myb/SANT-like DNA-binding domain 199 286 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1587 Bisa-ChrBisa12 29553699 29559378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1587 191 506 Trihelix Transcription Factor Family AT3G14180 26.966 5.54e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa12g1587 Myb_DNA-bind_4 1.5e-19 CL0123