Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1556 ATGGCAAAGCAAGCACCTTTTTCCTCTTCCTTCAACTATCAATGGACTTATGATGTGTTCCTTAATTTTAGAGGTGAGGATACGCGCTTTAATTTTACAAGAAACCTCTACAAAGCTCTGGATCAAAAGGGTATTCACGCCTTCATAGATGACGAGGGGCTAAGAAGAGGTGAAGAGATCACTCCAGCACTTCTAAAAGCAATCGAAGAATCTAGAATTGCCATCACTATTTTCTCCAGAAACTATGCTTCCTCCGCATTTTGTTTAGATGAGCTTGTAAACATCATTGAGTGCATAAAGGAAAAGGGTAGATTGGTTTTGCCTGTTTTCTATGGCGTGGATCCGTCAGAAGTGCGTCATCAGAGAGAAAATTACAGAGAAGCTTTTGCCAAGCACGAGAAAAGATTCAAGAACGACAAGGAGAAGGTGCGAAAATGGAGGCTGGCTCTCCATGATGCTGCTAATCTCTCTGGTCTCCCTTTTAAACCTGGCCAGGAATACGAATATCAATTTATAGAAAGGATTGCTAAAGAGGTCTCTTGGAGGATTAATCGTAGCCCTTTACACATTGCTGATTACCCAATTGGAATTGAGGCTCGAGCACAACAAGTGATCTCTCTTCTCGATCTTGGGTCTAATGAGGGAGTCCAAATGGTTGGGATTTGTGGCATTGGTGGAATAGGTAAAACAACAATTGGCCGAGCAGTATATAATTTGATTGCTGACCCATTTGATGGCATCTGCTTTCTAGCTGATGTTAGAGAAAATTCAATAAAGCATGGTCTTGTACATCTCCAAGAAAGGCTTCTTTCTGAGATAGTTGGGGAGGATATCAAGTTAGTAGACATCAATAAAGGAATTCCAATAATAAAACATAGGCTCCAACGAAAGAAGGTTCTTTTAGTTCTTGATGATGTTGATGAGCAAAAACAATTGCAGGCAGTTGCTGGAGGACTTGATTGGTTTGGTTTTGGCAGTAGAATCATTATAACAACAAGGGATATGAGTTTGCTAGCAAGACATGGTGTCAATAGAATTTATGAGGTACAGAGCTTAAATGAAGAAGAAGCTCTTGAATTGCTTATATGGAATGCCTTTAGACAACATAGAATTGATCCAAGTTACATGGAAAATTTAAACAACGTAGTACTCTATGCTTGTGGTCTTCCATTGGCTTTGGAAGTTGTAGGTTCCAACTTGTTTAATAGAGAACCAGATGATTGGGATTCTGCATTAGATAGTTATCGAAGAATTCCCAATAAAAAGATTCAACAGATACTTAAAGTAAGTTATGATACTTTGGAGGAACATGAGCAGGAAATTTTTCTTGACATTGCTTGTTGTTTTAAGGGAGACACATTGGAATATGTTAGAAGTGCACTTTATGGTCGAAGTATATGTCCAGATTATGCTATTAAAGTCTTGATTGATAAATCTCTCATAAAGATTGATTCTGGTCATGTGTCAATGCATGAATTGATTCAAGATATGGGTAGAGAAATTGTTCGGTACCAATCACCAAAAGAGCTTGGCGAACGCACTAGGTTGTGGTTCCACGAAGACATTCTTCATGTTTTGGAAGAAGACAAGGGAACTATGAAGATTGAAGCCATAAATTTGGACATGCCTGGAGACGCAAAGGTGGATTGGAATGGTGAGGCATTCAAAAATATGCCAAACCTTAAGATACTTATCATTAGAAATTCATGCTTTTTGACAGGTCCCAAGTATATCCCAAACAGTTTAAGAGTGTTAGATTGGACAGGATATCCTTGTCCATCTTTACCATATGATTTTTATCCTAAGCAACTTGTCATCCTCAAGGTGCCCAGAAGTGGCTTCAAATTGGATGAACAGCTCAAGAAGTTCCAATCTTTGAGTTCTCGTAGCATATTACTGAGTCAGGCATTACTTGAGGTTGAGAACTTGCAGTTTATTGTAGAAGGAGACAGGATGCCTGAATGGCTTGACTGCTATACCAGGGGAGGAGACTTCTCTGCATATGATTTATGGGACTTAGCTGAATATGAAGAGGATTTAGGAGACTTCTTTGCATATGATTTATGGGACTTACCTGAATATGAAGAGGATTTAGGAGACTTCTCTGCATATGATTTATGGGACTTACCTGAATATGACGAGGATTTGTCATACTTATTTGAAGATGAAGATGAAGATGAAGATGAAGAGGATTTTGTGGACTTCTCTGCATATGAAGATGATTTATTAAACTGGGCTTCAGATATAGATCAATGTTCCAATGCTCATACAAGCTGTATTGATCATAGTAGCAGTACTGCAGTAGCAACCTGTATTGTAAAGCAATCAGATTCACCTCTCGTTTATCAGTTTTCTCCTTTCTTGTTATTATTGTCTATACTCATTAGTTCATTTGTCTTCTCACTTCTTGCTGTTATTGATTTATTTGCTCCTAACCCAACATCTACTTGCTCCCAACGGTTTCTTGCTAATTCTAGGTCTAGCAACGTCCACTTTAACTAG 2502 0.3857 MAKQAPFSSSFNYQWTYDVFLNFRGEDTRFNFTRNLYKALDQKGIHAFIDDEGLRRGEEITPALLKAIEESRIAITIFSRNYASSAFCLDELVNIIECIKEKGRLVLPVFYGVDPSEVRHQRENYREAFAKHEKRFKNDKEKVRKWRLALHDAANLSGLPFKPGQEYEYQFIERIAKEVSWRINRSPLHIADYPIGIEARAQQVISLLDLGSNEGVQMVGICGIGGIGKTTIGRAVYNLIADPFDGICFLADVRENSIKHGLVHLQERLLSEIVGEDIKLVDINKGIPIIKHRLQRKKVLLVLDDVDEQKQLQAVAGGLDWFGFGSRIIITTRDMSLLARHGVNRIYEVQSLNEEEALELLIWNAFRQHRIDPSYMENLNNVVLYACGLPLALEVVGSNLFNREPDDWDSALDSYRRIPNKKIQQILKVSYDTLEEHEQEIFLDIACCFKGDTLEYVRSALYGRSICPDYAIKVLIDKSLIKIDSGHVSMHELIQDMGREIVRYQSPKELGERTRLWFHEDILHVLEEDKGTMKIEAINLDMPGDAKVDWNGEAFKNMPNLKILIIRNSCFLTGPKYIPNSLRVLDWTGYPCPSLPYDFYPKQLVILKVPRSGFKLDEQLKKFQSLSSRSILLSQALLEVENLQFIVEGDRMPEWLDCYTRGGDFSAYDLWDLAEYEEDLGDFFAYDLWDLPEYEEDLGDFSAYDLWDLPEYDEDLSYLFEDEDEDEDEEDFVDFSAYEDDLLNWASDIDQCSNAHTSCIDHSSSTAVATCIVKQSDSPLVYQFSPFLLLLSILISSFVFSLLAVIDLFAPNPTSTCSQRFLANSRSSNVHFN 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1556 833 Gene3D - 13 184 IPR035897 -
Bisa12g1556 833 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 158 IPR035897 -
Bisa12g1556 833 SUPERFAMILY L domain-like 513 615 - -
Bisa12g1556 833 Gene3D - 185 345 IPR027417 -
Bisa12g1556 833 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Bisa12g1556 833 Pfam TIR domain 17 185 IPR000157 GO:0007165
Bisa12g1556 833 PRINTS Disease resistance protein signature 556 572 - -
Bisa12g1556 833 PRINTS Disease resistance protein signature 218 233 - -
Bisa12g1556 833 PRINTS Disease resistance protein signature 386 400 - -
Bisa12g1556 833 PRINTS Disease resistance protein signature 293 307 - -
Bisa12g1556 833 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 445 IPR027417 -
Bisa12g1556 833 SMART till_3 16 156 IPR000157 GO:0007165
Bisa12g1556 833 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 644 IPR044974 GO:0006952
Bisa12g1556 833 Gene3D - 351 435 IPR042197 -
Bisa12g1556 833 Pfam NB-ARC domain 200 433 IPR002182 GO:0043531
Bisa12g1556 833 Coils Coil 122 142 - -
Bisa12g1556 833 SUPERFAMILY "Winged helix" DNA-binding domain 421 527 IPR036390 -
Bisa12g1556 833 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1556 Bisa-ChrBisa12 28087308 28095893 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1556 216 646 WRKY Transcription Factor Family AT5G45050 35.560 1.72e-65 236