Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa12g1551 | ATGGATACTGTTAAATGGAATTTTTTGTTTGTTTGTTTTGTCGATGGATCGTGGCATGGCTTATTAGAAAGAAATGAGCAGTATTTCTCGATTTGGGGGGTTTCCAGAATTGGAGGCTGCAAAATGTCTCTACAGCAACAGCAAACCAATCCTGATCTCAATGGTGTTTCAGGGTCAGGATATTGCCTTTATGATCTTTTGTGTGCTGATACACAAAATTTGCAACCCCAAAGAAATCAATGGAATACTTCAGACAGTGACGACCCTCAAGAAAAGCTAGAGAAGCTGATGAACCAAGATGGCAACAAGCATTGTGCTGATTGTGGATCTCCGGATCCAAAATGGGTATCTTCAAGTATTGGAGTTTTTATTTGCATCAAGTGTTCTGGCATACATAGAAGCCTAGGAGTCCACATATCAAAGGTTCTATCGCTGAAGCTAGACCAATGGACAGAAGAACAAGTTGACGTACTGGAAAGTTTTGGTGGAAACGCAGTACTAAATAAGAAGTATGAATCTTGCATCCCAAGTCATGTAAAAAAACCAAAGCCGAATTCTTCCATTGAGGAGCGTGCTGATTTTATCAGGAAAAAATATGAGCTGCTGCAGTTTTCATCGTCCGAAGAAGAACCCTTGTCCTGCCCCTTTCCACCACCACAGGGCAGTTCCTCATGCGCCAATGCTTCTCTAGACAAGAAAAATTCTACTAAACCTGCAAACAAGCATCGTATTGGGAATGCGTTTCGGAACAGCTGGGGAAGAAAAGAACCTGACCATACTAAGTCTTCAAAGAAAAGCAACTCGTTGGCTGGTATGGTTGAATTTGTTGGCTTGATAAAGGTTAATGTGGTCAAAGGCACTAACCTGGCCGTTCGGGACGTAATGACTAGTGACCCCTACGTCATCCTTTCTTTGGGTCACCAATCAGTAAAGACGCGCGTCATAAAGAACAATCTGAATCCAGTCTGGAATGAGAGCCTAATGCTGTCAATTCCCGACAACATTCCTCCTCTTAAAGTGCTTGTGTATGACAAAGATACATTCTCCACTGATGATTTTATGGGTGAAGCCGAAATAGACATCCAACCCCTACTCGCAGCTGCTAGGGCACTTGAGATATCCTCAATCGACAGTGAGTCCACACATCTTGGGAAATGGGTGGCAAGCAGGAAGAACAGCCTTCTCAAAGACGGCGACATCTTAGTCGAAGATGGCAAGATCAAACAGGGAATATCGGTGAGGCTACAAAATGTAGAGAAAGGGGAGCTTGAAGTTCAGCTTGAGTGCGTTCCTCTCACCCAATAA | 1305 | 0.4337 | MDTVKWNFLFVCFVDGSWHGLLERNEQYFSIWGVSRIGGCKMSLQQQQTNPDLNGVSGSGYCLYDLLCADTQNLQPQRNQWNTSDSDDPQEKLEKLMNQDGNKHCADCGSPDPKWVSSSIGVFICIKCSGIHRSLGVHISKVLSLKLDQWTEEQVDVLESFGGNAVLNKKYESCIPSHVKKPKPNSSIEERADFIRKKYELLQFSSSEEEPLSCPFPPPQGSSSCANASLDKKNSTKPANKHRIGNAFRNSWGRKEPDHTKSSKKSNSLAGMVEFVGLIKVNVVKGTNLAVRDVMTSDPYVILSLGHQSVKTRVIKNNLNPVWNESLMLSIPDNIPPLKVLVYDKDTFSTDDFMGEAEIDIQPLLAAARALEISSIDSESTHLGKWVASRKNSLLKDGDILVEDGKIKQGISVRLQNVEKGELEVQLECVPLTQ | 434 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa12g1551 | 434 | ProSiteProfiles | C2 domain profile. | 260 | 375 | IPR000008 | - | |
Bisa12g1551 | 434 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 274 | 369 | IPR035892 | - | |
Bisa12g1551 | 434 | SMART | arf_gap_3 | 90 | 209 | IPR001164 | GO:0005096 | |
Bisa12g1551 | 434 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 90 | 204 | IPR037278 | - | |
Bisa12g1551 | 434 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 | 86 | 434 | IPR044518 | GO:0005096|GO:0005543 | |
Bisa12g1551 | 434 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 90 | 212 | IPR001164 | GO:0005096 | |
Bisa12g1551 | 434 | Pfam | Putative GTPase activating protein for Arf | 91 | 206 | IPR001164 | GO:0005096 | |
Bisa12g1551 | 434 | MobiDBLite | consensus disorder prediction | 219 | 234 | - | - | |
Bisa12g1551 | 434 | MobiDBLite | consensus disorder prediction | 210 | 266 | - | - | |
Bisa12g1551 | 434 | CDD | ArfGap | 93 | 199 | - | - | |
Bisa12g1551 | 434 | Gene3D | C2 domain | 276 | 434 | IPR035892 | - | |
Bisa12g1551 | 434 | PRINTS | HIV Rev interacting protein signature | 142 | 163 | IPR001164 | GO:0005096 | |
Bisa12g1551 | 434 | PRINTS | HIV Rev interacting protein signature | 102 | 121 | IPR001164 | GO:0005096 | |
Bisa12g1551 | 434 | PRINTS | HIV Rev interacting protein signature | 121 | 138 | IPR001164 | GO:0005096 | |
Bisa12g1551 | 434 | Gene3D | Arf GTPase activating protein | 69 | 212 | IPR038508 | - | |
Bisa12g1551 | 434 | Pfam | C2 domain | 278 | 366 | IPR000008 | - | |
Bisa12g1551 | 434 | SMART | C2_3c | 278 | 373 | IPR000008 | - | |
Bisa12g1551 | 434 | FunFam | stromal membrane-associated protein 1 isoform X1 | 75 | 210 | - | - | |
Bisa12g1551 | 434 | CDD | C2_ArfGAP | 276 | 421 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa12g1551 | Bisa-ChrBisa12 | 27965089 | 27970423 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa12g1551 | 90 | 434 | C2H2 Transcription Factor Family | AT4G21160 | 48.406 | 7.38e-111 | 328 |