Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1475 ATGATATACGTGAGGTGTAAACATGCAGTTAATTCGTCGGTGTTGGTGGACAGTGCCCCTTGTGTGGAAGCTTCAAATGGGTCATCAGGTTCTTCTTCTTCATTGTATAATTTGTCTGTGAATGTTGGCAACCAATACGTAAAGCTACGGGATTTGGAGTTAGAGGACGATTGTCGAATAGAGCTGATGTATATGACATCGTGGCCTGACGCAAAGGAGGGCGCCATCAATTCCTGCAGAGATATCCACAATATGCATGTTTATGGCTTTGAGCTTTCATGGCTCAACAGCATCTGTCACAAGCCTCGACAGTTTGCCTATCTCGATTTCCGTAAGAAGCCTACGTGTAGAGGCTATTCAGAAGTCCAGTTAATCTTTCTGGTTACTGGCTTGGTGGGCTCGGTGGTAATTCTAATAGTTGTACATGCTGTTGCCAAATGTGTTTTGTGTTACCCGTTTGCCATTGTGTTCTTGATCTACAAATGGCGGCGAAGACATTTATGTATGTATGAAAGCATTGAAGATTTTCTACAGAGTGACAATAACATCATGCCGGTGAGGTATTCTTACAAAGACATCCGGAAGATGACTGAAGGGTTCAAAATTAGACTGGGAAAAGGAGGCTGTGGCTCTGTTTATAAAGGGAAACTTCGAAGTGGCCGTCTTGCCGCTGTCAAGATGTTAGATAAGGTCAAAGCTGGCGGTCAAGAATTCATAAATGAAGTTGCCACACTTGGTAGAATCCATCATGTTAACATAGTTCAATTAATTGGTTATTGCGTTGAAGGGTCAAAGCGTGCTCTTATATACGAGTTTATGCAAAATGGGTCTCTTGACAAATACATTTACTCTCAACAAAAGAATGATCTTTCCTTGGATTGTGATAAGTTGTTTGCTATTTCTCTTGGAGTAGCTCGTGGTATTGAATATCTACATAAAGGATGCAATATGCAAATATTACACTTTGATATAAAGCCGCACAATATTCTTCTCGATGAAGACTTTAATCCAAAGGTTTCTGATTTTGGACTTGCTAAACTCTATCCTACAGATAACATGATTGTATCTCTAACAGCAGCAAGAGGAACTATAGGATATATGGCTCCTGAACTCTTCTATAGAAATGTGGGTGGGATCTCATACAAAGTTGACGTATATAGCTTTGGAATGCTGCTAATGGAGACGGCTGGTAGAAGGAAAAACTTGAATGCATTGGCTGAACATTCAAGCCAACTTTACTTTCCCTTTTGGGTTTATGATCAGCTACAAGAAGGACAAGAAATTAACATTGCAAATGTCACAGTTGAGGATATGAAATTGGTGAAGAAAATGATGGTCGTGGCATTGTGGTGCATACAAACAAACCCTATGGATCGTCCTTCAATGTACAAAGTTGTGGAGATGCTTGAAGGAGAAGCGGAAGACTTAGAAATGCCACAAAAGCCTTACCTATATCCACAAGAATTACCAACAGTGGATGATAGAGATCACACAAGTTCAACTACACCATCCACGGATCAATCAAGAAGTGATTCTAAAGATTTAGTCTCACTTTTAGCCCAGGAGAATGAATGCTCTATTTAG 1584 0.4028 MIYVRCKHAVNSSVLVDSAPCVEASNGSSGSSSSLYNLSVNVGNQYVKLRDLELEDDCRIELMYMTSWPDAKEGAINSCRDIHNMHVYGFELSWLNSICHKPRQFAYLDFRKKPTCRGYSEVQLIFLVTGLVGSVVILIVVHAVAKCVLCYPFAIVFLIYKWRRRHLCMYESIEDFLQSDNNIMPVRYSYKDIRKMTEGFKIRLGKGGCGSVYKGKLRSGRLAAVKMLDKVKAGGQEFINEVATLGRIHHVNIVQLIGYCVEGSKRALIYEFMQNGSLDKYIYSQQKNDLSLDCDKLFAISLGVARGIEYLHKGCNMQILHFDIKPHNILLDEDFNPKVSDFGLAKLYPTDNMIVSLTAARGTIGYMAPELFYRNVGGISYKVDVYSFGMLLMETAGRRKNLNALAEHSSQLYFPFWVYDQLQEGQEINIANVTVEDMKLVKKMMVVALWCIQTNPMDRPSMYKVVEMLEGEAEDLEMPQKPYLYPQELPTVDDRDHTSSTTPSTDQSRSDSKDLVSLLAQENECSI 527
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1475 527 ProSiteProfiles Protein kinase domain profile. 198 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1475 527 MobiDBLite consensus disorder prediction 477 527 - -
Bisa12g1475 527 MobiDBLite consensus disorder prediction 496 527 - -
Bisa12g1475 527 FunFam PR5-like receptor kinase 273 481 - -
Bisa12g1475 527 Gene3D Transferase(Phosphotransferase) domain 1 273 481 - -
Bisa12g1475 527 FunFam serine/threonine-protein kinase PBS1-like 169 272 - -
Bisa12g1475 527 Pfam Protein kinase domain 203 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1475 527 PANTHER RUST RESISTANCE KINASE LR10-RELATED 170 497 IPR045874 GO:0004672
Bisa12g1475 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Bisa12g1475 527 SMART serkin_6 198 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1475 527 Gene3D Phosphorylase Kinase; domain 1 167 272 - -
Bisa12g1475 527 SUPERFAMILY Protein kinase-like (PK-like) 179 470 IPR011009 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa12g1475 Bisa-ChrBisa12 26049523 26052815 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1475 125 490 Receptor kinase-like Gene Family AT5G38260 45.722 7.26e-104 323
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Bisa12g1475 Pkinase 4.4e-45 CL0016