Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1450 ATGGGCAAACACAGTTATTGGTGGGTCCTCCAATTCCTTCTCCTTCTCTCCCCACTCTTTGTGATCCATATTGGAGCTAGCAGAAGGCAAGAAGATGCTCTTAGGGATCTGATCAAGTCCAAATTCTTCAGCGGAGGTTCCATTGATAGGAGCAATAATTATGTTGTGTTTGAAACACAAGAATCTGAATTTTATGATGATTATAGGGGTGGTCGCTATCATCCTCAAGAGGGACTGAAAGAGAAAGATAAGATAGAGAGGCTTCCAGGGCAGCCTGTGGATGTGAAGTTTGCTCAGTATGGAGGGTATGTGACTGTGGATAAGATTGCAGGACGTGCCTTTTATTATTATTTTGTTGAAGCTCAACGATCTAATAAGGATGCATTGCCTCTTCTTCTTTGGCTCAATGGAGGGCCAGGATGTTCGTCTCTTGCGTATGGGGCAATGCAAGAGCTGGGACCCTTCCGAGTAAACAGCGATGGTAAAACACTTCACAAAAACAGATACTCTTGGAACCATGCTGCAAATGTTCTGTTCCTGGAGTCACCTGCTGGGGTGGGATTTTCATACTCAAACAAGTCATCCGATTATGGCAAAAGCGGCGACAGAAGAACCGCCGCAGATAACTACGTGTTCTTGGTGAAGTGGTTGGAAAGATTTCCAGAGTATAAGAACAGAGAGTTGTACATTGCAGGAGAGAGCTATGCTGGACACTATGTTCCTCAATTTGCTCACACTATCCTATTTCACAACAAAAAGGCTCACAGAACAGTCATCAACCTCAAAGGAATCATGATAGGGAATGCAGTGATAAATGACGACACGGACACACGAGGAATGTACGATTATCTGGCGAGCCATGCGATAATATCAGACAAAGCAGCGCATGACGTTAACAAAGAATGCGATTTCTCAGAAACAGCCACGTCGTCACAGAGCAACGAATGCAATGCAGCAACGGACGAGATAGAGAATGACGTCGACTCCATTAACATTTACAACATCTACGCTCCTCTCTGCCAAAACTCCAACCTCACATCCTCCCCCAATCCCATCTCTGTTGTGACGGACCCTTGCAGTGATTCTTATGTGTATGCTTACCTGAACCGACCTGACGTTCAAGAGGCGATGCATGCCAATGTCACCAAACTCACTCAAGACTGGGAACCCTGCAGCGATGTGATCACAAATTGGGTTGATAGTTCTTCCACTGTCATTCCTCTCTTGCAAGAATTCCTCCATAATGGCCTTAGGGTTTGGATTTTCAGTGGTGATACAGACGGAAGAGTGCCAGTTACATCAACCAAGTATTCCATTGAGAAGATGAAGCTTCCTGTTACAACTGTTTGGCATCCTTGGTTCGTTAATGGAGAGGTTGGAGGATACTCACAAGTGTACAAAGGAAACCTAACATTTGCAACAGTGAGAGAAGCAGGGCATCAAGTCCCAAGTTATCAGCCAGCAAGAGCTCTTTCTTTGGTCTCCCACTTCTTAAACGGCACTCCTCTTCCTAATACATCAAAAACCGCATAG 1533 0.4501 MGKHSYWWVLQFLLLLSPLFVIHIGASRRQEDALRDLIKSKFFSGGSIDRSNNYVVFETQESEFYDDYRGGRYHPQEGLKEKDKIERLPGQPVDVKFAQYGGYVTVDKIAGRAFYYYFVEAQRSNKDALPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLHKNRYSWNHAANVLFLESPAGVGFSYSNKSSDYGKSGDRRTAADNYVFLVKWLERFPEYKNRELYIAGESYAGHYVPQFAHTILFHNKKAHRTVINLKGIMIGNAVINDDTDTRGMYDYLASHAIISDKAAHDVNKECDFSETATSSQSNECNAATDEIENDVDSINIYNIYAPLCQNSNLTSSPNPISVVTDPCSDSYVYAYLNRPDVQEAMHANVTKLTQDWEPCSDVITNWVDSSSTVIPLLQEFLHNGLRVWIFSGDTDGRVPVTSTKYSIEKMKLPVTTVWHPWFVNGEVGGYSQVYKGNLTFATVREAGHQVPSYQPARALSLVSHFLNGTPLPNTSKTA 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1450 510 FunFam Carboxypeptidase 405 500 - -
Bisa12g1450 510 Gene3D - 405 500 - -
Bisa12g1450 510 Pfam Serine carboxypeptidase 89 500 IPR001563 GO:0004185|GO:0006508
Bisa12g1450 510 ProSitePatterns Serine carboxypeptidases, serine active site. 230 237 IPR018202 GO:0004185
Bisa12g1450 510 FunFam Carboxypeptidase 79 342 - -
Bisa12g1450 510 Gene3D - 359 396 - -
Bisa12g1450 510 Gene3D alpha/beta hydrolase 78 349 IPR029058 -
Bisa12g1450 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 216 241 IPR001563 GO:0004185|GO:0006508
Bisa12g1450 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 179 IPR001563 GO:0004185|GO:0006508
Bisa12g1450 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 470 483 IPR001563 GO:0004185|GO:0006508
Bisa12g1450 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 190 IPR001563 GO:0004185|GO:0006508
Bisa12g1450 510 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 84 487 IPR001563 GO:0004185|GO:0006508
Bisa12g1450 510 FunFam Carboxypeptidase 357 503 - -
Bisa12g1450 510 SUPERFAMILY alpha/beta-Hydrolases 82 504 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1450 Bisa-ChrBisa12 25338899 25347353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1450 367 503 Calmodulin-binding Proteins AT2G22960 29.927 1.33e-16 76.3