Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1409 ATGTCTCACAATTCATCGCATTATATGTGGGCGTCAGTGGCGCAATCAAACCCGTGTGCAGAAAAGCTGGGTTCGCTGGTGTTTTTAGTATCCAAAAACTTCATTATATTTTTGGCTATGGTGCTTGCATGCAATGGCGTCCATTATCTGCTTAAGCCTTATTCAATGCCTCGCATTCTTACTGACATCTTTGTAGGACTTCTGGTGGGAAACATATCTTTCCTCCGTTCCGTATACAAAGAATTCAACAAGACCTTCAGCTTCATCATCGACTTCGTGATGATGTTCTACATGTTCACTCTGGGCATCGAAATGGACCCTTACGCCATCTTCAAGCAACCCTCTCGCGACGCTCAGATCGCCTACGCCGGCATCCTCACCACCCTTGTCCTCGCCTGCTCCATCACCCCCTTCTTCCACTACTTCACCCCAAAGTACAAGGCCGAGTTCACGCTCTGCCTCTCCGCCCTCCTCTCGGGCACCGCCTCCCCCGTCCTTACGCGCCTCATCACCAGCCTCAAGATCAGCAAATCCGACATCGGCAAGCTCGTCATCGCCGCAGGCATGCACTCCGACTTCCTCTGCAACCTCTTCCTCTCCCTCGGCTTCATCGGCCTGCCGCTTCCCCTGTTCTGCAACTTCAACGAGAACAACAACAACGACAACGATAACTCCAGCACCTTCAATAACAGATACTCCTACAACGAGCAACTGCTCAAGATCTCGATCGTGATGGGAGTCGTGGTGTTAGTGCAGGCTCTGTTCACGATTGCGGTGTCGCCGTTTTTGATGAATTGGGTGAATAACGAGAATCCGGAGGGGAGGCCGATGAAGGGATCGCATCTGGTGCTGTCGATTGCGTTCATCGTGCTGATCTGTGCTGTGCCGACGCTGTTCCATTACAGTCCGATTCTGAGCGCGTTCCTTGCAGGCGCTTGCATGCCGCGTGAGGGGAGGCTGTCGAAGTGGTTAATCACGAGGATTAACTTCCTATTGTCGACGATTTTTTTCCCCATTTTCTTCTTGTGGATGGGGTGTGGAGCGGATTTCAGGTACTTCAAGGCAGGGCAGGGTGGGACCTGGGTCAAGCTGGTGATGCTAATTGTGATTGGGATTGCGAGTAAGGTGGCTGGCACGGTGGCGTTTGGGTCCATTCTGGGCTATAATCTGCCCGATTCCGTCGCCATTGGCTTGCTTCTTACCACCAAGGGACATTTTCATATCTACTTGGCCGTCAAAGTGATGAAATGTGGAGGCAATACTTCCACTGGCATTGTGATGATAATTGCAATCTTTTTCACAGTTCTGCATTCCCCTTTCGTGGTGGCTCACATCATCAAGCGAGCCAGGAAGAAGACCCCCACCCACCGCATGGCCCTCCAACTCCTCCACCCCTCCAGCGACCTCAAACTCATGCTCTGCCTCCACGGCCCCCAAAACGCCCCCGCCTCCCTCAACTTCATGGACATCACCCGCGGAACCACCGACCCGCCAATGGTCCTTTACGTCACCGAACTGCTCGAACTCACCGACGACCTCGCCGCTGCAGCGCAGGCGCACGCAGGGGATAATAATGCCGCGGCTTTGGCGGATACGGGAATTGTGGCTATGAGAGACCAGGTGACGAGGTCGTTTCAGGTGTATTTAGACGAAGATGGGGATGGGATTAGTCTGAAGAGGTCGATGGTCGTTTCGACCTTTAACAATATGGCGCGCGACGTATGTGCTTTGGCTGAAGAGTCCGGGATTGCGCTTATTGTATTGCCGTTTCATAGGACGCAGCGTCAGGACGGCACGCTGGACGGTGGCAATCCGGGCTTCAGGCACGTCAATCGAAAGGTGATGAAAGGCGCGCCATGTTCTGTAGCAATCCTAGTCGACAGAGGCTTCGGAAGCATAAATAGGATTGACAGATCTTCCGTCTCAGTCAACGTCGCCGTAATCTTCGTCGGCGGAAAAGATGACCGAGAAGCCCTCGCCTACGCCGGCCGCCTCGCCCGACACCCCGGCGTCAAGCTCACCGTCCTAAGATTGCTCGTAGAAAGCGGATCGGAGAACCCGCAGCCCTCCGGCCACCACGGCGTGAACATATCAGATCAAGAGGCGGAGGTGGGGCTCGACGACGAGTGTTTCGCGCAGTTCTACGAACAACACATCGTCGGAGGTCGTATTGCCTACATGGAGAAGCACCACAAGAACTCTGCCGAAACGTTCTCGGTGCTGAAGTCGTTCGAAGGGATGTACTCTCTGGTAATTGTGGGAAGAGAAGGAGGGGTGAACTCAGTGTTGACGAAGGGGATGAACGATTGGCAGCAATGTCCGGAGTTGGGACCCATAGGGGATGTTCTTTCGGGGCCAGATTTTTCGTTGACGGTCTCGGTGTTGGTTATGCAACAACACAAGCTTAAAGGAGAGATTGATGGGTTAGATGATGATTTCACTGTCATGATGTAG 2454 0.5334 MSHNSSHYMWASVAQSNPCAEKLGSLVFLVSKNFIIFLAMVLACNGVHYLLKPYSMPRILTDIFVGLLVGNISFLRSVYKEFNKTFSFIIDFVMMFYMFTLGIEMDPYAIFKQPSRDAQIAYAGILTTLVLACSITPFFHYFTPKYKAEFTLCLSALLSGTASPVLTRLITSLKISKSDIGKLVIAAGMHSDFLCNLFLSLGFIGLPLPLFCNFNENNNNDNDNSSTFNNRYSYNEQLLKISIVMGVVVLVQALFTIAVSPFLMNWVNNENPEGRPMKGSHLVLSIAFIVLICAVPTLFHYSPILSAFLAGACMPREGRLSKWLITRINFLLSTIFFPIFFLWMGCGADFRYFKAGQGGTWVKLVMLIVIGIASKVAGTVAFGSILGYNLPDSVAIGLLLTTKGHFHIYLAVKVMKCGGNTSTGIVMIIAIFFTVLHSPFVVAHIIKRARKKTPTHRMALQLLHPSSDLKLMLCLHGPQNAPASLNFMDITRGTTDPPMVLYVTELLELTDDLAAAAQAHAGDNNAAALADTGIVAMRDQVTRSFQVYLDEDGDGISLKRSMVVSTFNNMARDVCALAEESGIALIVLPFHRTQRQDGTLDGGNPGFRHVNRKVMKGAPCSVAILVDRGFGSINRIDRSSVSVNVAVIFVGGKDDREALAYAGRLARHPGVKLTVLRLLVESGSENPQPSGHHGVNISDQEAEVGLDDECFAQFYEQHIVGGRIAYMEKHHKNSAETFSVLKSFEGMYSLVIVGREGGVNSVLTKGMNDWQQCPELGPIGDVLSGPDFSLTVSVLVMQQHKLKGEIDGLDDDFTVMM 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1409 817 Pfam Sodium/hydrogen exchanger family 36 444 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Bisa12g1409 817 Gene3D - 31 456 IPR038770 -
Bisa12g1409 817 PANTHER CATION/H + ANTIPORTER 35 801 - -
Bisa12g1409 817 Gene3D - 489 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1409 Bisa-ChrBisa12 24234527 24241603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1409 35 816 Antiporter Super Family AT3G52080 46.667 0.0 736