Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1376 ATGGCTCAGAAGACTGAGAAGGAAGAGACCGAGTTCAAGGTTCCTGATACCATAATCCCCTGCGTCAACAACTGCGGCGTCATCGGAAACCCTGCGACTAACAACATGTGCCAGAAGTGCTTCAACGCTACCACAACCACCACCGCGACATCGTCATCCTCCTCCTCCTCGTCTTCCTCAGCCGCCGCCAACGCCGCCGTGTCTGCCGGAATTTCAGCGGCTTCTAAATTTGCCGACGAGAAGAGTTCTAGATCTACCCCGTCTCGTTCTCCCAAGAGATCTTATCCTTCCGACGAGCCAGCACTAACGCCGGATCGATCGAATCCGGGCGAGGCGACGCAGTCCGAGGCGAAGCGCGTCGTGAGCCGGTGCTCTGGATGCCGAAGGAAGGTCGGGTTGACGGGGTTCCGGTGCCGGTGCGGGGAGTTGTTTTGCGCCGAGCATAGGTACTCCGATCGCCACGATTGTAGCTACGACTACAAAGCGGCTGGACGCGAGGCGATCGCGAGGGAAAATCCGGTGGTCAAAGCCGCGAAGATCGTCAAAGTTTGA 552 0.5797 MAQKTEKEETEFKVPDTIIPCVNNCGVIGNPATNNMCQKCFNATTTTTATSSSSSSSSSSAAANAAVSAGISAASKFADEKSSRSTPSRSPKRSYPSDEPALTPDRSNPGEATQSEAKRVVSRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSYDYKAAGREAIARENPVVKAAKIVKV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1376 183 Gene3D - 1 66 - -
Bisa12g1376 183 SUPERFAMILY AN1-like Zinc finger 108 177 IPR035896 -
Bisa12g1376 183 Pfam A20-like zinc finger 19 42 IPR002653 GO:0003677|GO:0008270
Bisa12g1376 183 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 57 - -
Bisa12g1376 183 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Bisa12g1376 183 ProSiteProfiles Zinc finger AN1-type profile. 118 164 IPR000058 GO:0008270
Bisa12g1376 183 FunFam Zinc finger AN1-type containing 6 101 179 - -
Bisa12g1376 183 FunFam Zinc finger A20 and AN1 domain-containing stress-associated protein 1 1 100 - -
Bisa12g1376 183 Gene3D - 100 179 IPR035896 -
Bisa12g1376 183 PANTHER AN1-TYPE ZINC FINGER PROTEIN 20 182 - -
Bisa12g1376 183 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Bisa12g1376 183 MobiDBLite consensus disorder prediction 75 115 - -
Bisa12g1376 183 Pfam AN1-like Zinc finger 124 161 IPR000058 GO:0008270
Bisa12g1376 183 SMART AN1_Zf_4 124 161 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1376 Bisa-ChrBisa12 23680988 23681539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1376 8 183 C2H2 Transcription Factor Family AT3G52800 37.500 9.52e-33 113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1376 12 23680988 23681539 Bisa02g2681 02 68057687 68058199 ECH
Bisa12g1376 12 23680988 23681539 Bisa12g1376 12 23680988 23681539 ECH