Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1374 ATGTTTCAGCTTGATTCTTCTAGGGTTTCTTTGGGGAGAGGAAGCTGGCCGTGGCCTGGGATTCCTGAAGCTGCAAGAATGGTGGAGAAGACGGCTAAAGGAAGAAAGGAGGAGGTGGTCACGAGAGAGCACACGATCAACCTTCACAAGCGCTTGCATGGATGCACATTCAAGAAGAAGGCTCCTAAGGCAATTAAAGAAATTAGGAAGTTTGCCCAAAAGGCAATGGGAACAACTGATGTGAGAGTGGATGTCAAGCTCAACAAATATGTTTGGAGCCAAGGAATTCGGAGTGTCCCGAGGAGAATCCGTGTTCGCATAGCACGAAAAAGAAATGATGAAGAAGATGCCAAGGAGGAGTTTTACTCATTAGTCACCGTTGTAGATATTCCTCCAGAAGAATGGAAAGGTATGGGCACCAAGGTGATTGATGAAGAGGATTGA 444 0.4617 MFQLDSSRVSLGRGSWPWPGIPEAARMVEKTAKGRKEEVVTREHTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKYVWSQGIRSVPRRIRVRIARKRNDEEDAKEEFYSLVTVVDIPPEEWKGMGTKVIDEED 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1374 147 CDD Ribosomal_L31e 36 119 IPR000054 GO:0003735|GO:0005840|GO:0006412
Bisa12g1374 147 SUPERFAMILY Ribosomal protein L31e 38 119 IPR023621 -
Bisa12g1374 147 FunFam 60S ribosomal protein L31 33 146 - -
Bisa12g1374 147 ProSitePatterns Ribosomal protein L31e signature. 81 95 IPR020052 GO:0003735|GO:0005840|GO:0006412
Bisa12g1374 147 PANTHER 60S RIBOSOMAL PROTEIN L31 28 146 IPR000054 GO:0003735|GO:0005840|GO:0006412
Bisa12g1374 147 SMART Ribosomal_L31e_2 37 120 IPR000054 GO:0003735|GO:0005840|GO:0006412
Bisa12g1374 147 Gene3D - 35 147 IPR023621 -
Bisa12g1374 147 Pfam Ribosomal protein L31e 38 119 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1374 Bisa-ChrBisa12 23660302 23661825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1374 33 147 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 80.000 6.88e-65 192