Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1368 ATGTTGTTTCGATGTTCTTCCTGTTTCAGTGTTGTTTCTCACTCCTCTAATTTTCCTCACTCTTTACAGGTTTTTGAGCTTGAAGTTCTGTTGAAGGAAATTGCCATGAGTGTTGTGTATAGTAATTTTGCTACTGTGAAGTACTCACGAAACTGCCCAGAAATGGAGTATAAGAACAGCGACACGATACAACGTTGTCACTACCAGCAAAGTTCTGGATTATTAAGGTACCGTTCTGCTCCAAGCTCGTTGCTGTCGAGCCTGGGGGAGACCAGCCATGGCTGTGTCAGCGAAGCAGAAGAAGCTTCTAGAGGTTTGGATCATCATCATCAGCAAAGTGGTTATGCTGAATCATTGGGTTCAGAAATGGAAGCCATGATGACCAAGTTGGCTGCTTCTTCTTCCAACAATGGATGGAGCAATGTGAAGCAAGAAGAAGAAGAAAGAAAGGACCCTGTTTTCTGTCATGGTGGTGGTTCTGGTTCTGGTTCTGATCAGATGATGTACCATTCTCAGGAATTTCTAGGGTTTCCGAGTGGTTGTTCTTCTTCTTCTTCAAGGGCAATGATGAACTTGGAGATCTCCAATCAATCCAAAATGGGTTATGGGAATTGCTCCAATCCTCTCATGAGGCAGAAGAGCTCTCCTGCGGGGTTTCTCTCCAATTTGTCACTCACAAATGGTTTTGCAGCAGTGGGAGAAGAAGCTACAACGTCAAGTTCTGTTACCTTCTCGTGTAGGCCATCGTCATCATCTTCTTGCCCAAGAAGGATGCCTCAGATTGCTGAAAATGGAAGTGAAACCCTAAATGAAGAACCCACAACAACTTGTGTTCAAGGCAGAAACCTAAGAGATGAAAATGGCTGCAACACAAGTTATAATAATATTCCCAGCTTCACCAATGACTTGTGGGAAAATTCTGCATTCACTGCTCAAAAAACAGCCTGTGACAGTGAAGAGTTCATGTTTTCTGCATCCAGTGCTTTGGAAACTCAGCATGCAGGTTTTGGATATCAGAATCTTGGATTGACTCATCAGTTGAGTTTGCCTAATTCTTCTTCTTCTCATATTGCTGCCATAGAGAGGTTTCTGCAAGTTCAAGGATCTGTTCCTTGCAAAATTAGAGCCAAAAGAGGCTTTGCAACTCACCCAAGAAGCATTGCAGAAAGGCAAACAAGCACAGCAGATATGTTGGATTTGGCAGTTGATTATATCAAAGAATTGCAAGAACAGGTTAAGATACTCGCAGATAGTAGGGCAAAGTGCAGTTGTTCACGTATTCAGAAGCAGTACTCATGA 1299 0.4288 MLFRCSSCFSVVSHSSNFPHSLQVFELEVLLKEIAMSVVYSNFATVKYSRNCPEMEYKNSDTIQRCHYQQSSGLLRYRSAPSSLLSSLGETSHGCVSEAEEASRGLDHHHQQSGYAESLGSEMEAMMTKLAASSSNNGWSNVKQEEEERKDPVFCHGGGSGSGSDQMMYHSQEFLGFPSGCSSSSSRAMMNLEISNQSKMGYGNCSNPLMRQKSSPAGFLSNLSLTNGFAAVGEEATTSSSVTFSCRPSSSSSCPRRMPQIAENGSETLNEEPTTTCVQGRNLRDENGCNTSYNNIPSFTNDLWENSAFTAQKTACDSEEFMFSASSALETQHAGFGYQNLGLTHQLSLPNSSSSHIAAIERFLQVQGSVPCKIRAKRGFATHPRSIAERQTSTADMLDLAVDYIKELQEQVKILADSRAKCSCSRIQKQYS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1368 432 CDD bHLH_AtbHLH_like 391 415 IPR045239 -
Bisa12g1368 432 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 78 424 - -
Bisa12g1368 432 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 363 424 IPR036638 GO:0046983
Bisa12g1368 432 MobiDBLite consensus disorder prediction 97 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1368 Bisa-ChrBisa12 23610234 23614429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1368 72 414 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 29.870 7.96e-30 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1368 12 23610234 23614429 Bisa02g2689 02 68168114 68171975 ECH
Bisa12g1368 12 23610234 23614429 Bisa12g1368 12 23610234 23614429 ECH