Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1357 ATGTTGAATGGCAGTGTTGGTCTGTTCAAGATTCAGAGGAATGCTATTGCTACATCCAGATTGCTATGCGCACGCGATTTCTCCACCAAATTGTTCGTTGCAGGTCTTTCTTATGATACTAATGAACCTGTTCTGAGGGATGCTTTTGGGCAATACGGTGAAATCATCGAAGTTAAAGTTATATGCGATCACGTAAGTGGGAAATCAAAAGGCTATGGATTCGTGCGGTTCACTCGTGAAGCTGAAGCGAGCGAAGCCCTGAAAGATATGAACGGCCAAGTAGTGGATGGCAGAAGCATCCGAGTGAGTTATGCCCACAAGGCGTAG 327 0.4557 MLNGSVGLFKIQRNAIATSRLLCARDFSTKLFVAGLSYDTNEPVLRDAFGQYGEIIEVKVICDHVSGKSKGYGFVRFTREAEASEALKDMNGQVVDGRSIRVSYAHKA 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1357 108 Gene3D - 12 108 IPR012677 -
Bisa12g1357 108 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 29 107 IPR000504 GO:0003723
Bisa12g1357 108 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 31 101 IPR000504 GO:0003723
Bisa12g1357 108 FunFam Glycine-rich RNA-binding protein 2, mitochondrial 14 108 - -
Bisa12g1357 108 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 28 107 - -
Bisa12g1357 108 SMART rrm1_1 30 103 IPR000504 GO:0003723
Bisa12g1357 108 SUPERFAMILY RNA-binding domain, RBD 28 106 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1357 Bisa-ChrBisa12 23478519 23479233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1357 29 107 Eukaryotic Initiation Factors Gene Family AT3G16380 44.304 1.43e-15 68.9