Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1356 ATGGTACAAAGAATCGGCACCAGGCTCTTCATTAGCAGATTATCATTCTACACGACAAATCACCATCTCAAAAATTTGTTCTCTCCATTTGGAATAGTCACAGAAGTTAGTCTTGTGAAGGACCCGAAAACTCAAAGGCCCAAAGGGTTTGGATTTGTCTCATACAAGTCAGAAATTGAAGCAGAGAAGGCTATGAAGGCCATGAATGGCAGGATAATTGATGGAAGGGTGATTTTTGTTGAACCTGCAAATGCTAAAAGACCTGTAGAAGATCGTGCCTCTTGA 285 0.4105 MVQRIGTRLFISRLSFYTTNHHLKNLFSPFGIVTEVSLVKDPKTQRPKGFGFVSYKSEIEAEKAMKAMNGRIIDGRVIFVEPANAKRPVEDRAS 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1356 94 SMART rrm1_1 8 81 IPR000504 GO:0003723
Bisa12g1356 94 SUPERFAMILY RNA-binding domain, RBD 6 88 IPR035979 GO:0003676
Bisa12g1356 94 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 85 IPR000504 GO:0003723
Bisa12g1356 94 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 8 85 - -
Bisa12g1356 94 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 2 88 - -
Bisa12g1356 94 Gene3D - 3 93 IPR012677 -
Bisa12g1356 94 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 78 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1356 Bisa-ChrBisa12 23475639 23478093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1356 6 93 Eukaryotic Initiation Factors Gene Family AT2G23350 34.091 8.54e-12 57.8