LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa12g1331	ATGCCTAGGAAAGGAATGAGGAACATCTTCTTCAAACCTTCGTCCCCTTCACCCTCGTCTGATTCTGTGTCCATCATGCCACCTTCCTCCCCCCTCCGGACTTTTTCCGACTCGTTAATCGACGAGAACATTGACTTTGCTCGCTCTATCATCAACAAATGGGACTCTAACCAGTCTTCCTACGCCAGAATCGCTTCTCTCTTCTCCGGAGCCCGCCAAGAAGCCAGGCAGTACCTTAACGCCGTCAGGGACCTGCAATCCGCCATGCGCTATCTCGTCGCGAAGGATTCCACCTCCGAGAAGCTCGTTCAGGCTCAGCGCTTGATGCAAGTTGCCCTGAAGAGGCTCGAGGAGGAATTCTATCAGATACTGTCCTCCAACAGAGAACATTTGGATCCTGAGTCTGTTTCGAGTCATTCGTCCACCGATCAGAGGACGAGCGTTTCTGATTTCGACGATGATTTCTCCGAGGACGAGTCTCGTTCTGTTGCAGGAAGTTCCATTTCCGAGACGGAAAGAGTGTCTATGGTTGCCATGGAGGATTTGAAGTCCATAGCGGAATGCATGATTTACGTCGGTTATGGCAGAGAGTGCGTCAAGATTTACAAGCTTACGAGGAAATCGATTGTCGACGAGGCTATATACCATCTCGGAGTGGAGAGGATGAGCTTCTCTCAGGTTCAGAAGATGGATTGGGGCGTGATTGAATTGAAGATCAAGAGTTGGTTGCAAGCCGTGAAAGTCGCCGTCGGGACTCTGTTTTACGGAGAGAGAATTCTCTGCGACCATGTCTTCGCCACATCGGAGAGAGTTGCAGAGTCCTGTTTCGCCGAGATTTGCAGAGAGGCCGCCATTTCTCTGTTTGGACTCCCAGAACTCGTGGCGAAGTGCAAGAAAACTCCAGAGAAAATGTTCAGGACTCTGGACTTGTACGAAGCAATCTCAGACAATTGGCAACAAATTGAATCCATCTTCTCATTTGAATCAACCTCCGCAATCCGATTACAGGCCATCAATTCCCTAGTCAAGCTAGGTGAAGCCGTAAGAACAATGCTCACCGACTTCGAATCGGCGATTCAGAAGGAAACCTCCAAGACGCCGGTGCCAGGTGGCGGAGTCCACCCGCTCACGCGCTACGTCATGAACTACATCACATTCCTCGCCGATTACAGCGGTATACTAGCCGACATAGTCGCCGATTGGCCGTTGACGATAAAATCTCCGTTACCAGAGTCTTACTTCCGTAGTCCAGAAAACGACAATAACCCGTCGTCGGAGATATCAGTACGGCTTGCGTGGCTAATACTCGTCGTTCTCTGCAAACTCGACGGGAAAGCCGAGCTATACAAAGACGTCGCACTTTCCTATCTCTTCCTCGCCAATAACCTGCAATACGTCGTCGATAAGGTTCGAAAATCCAATCTCAGCTTCATTATCGGCGAGGAGTGGCTGGTTAAGCACGAATCGAAGGTAAAAGAGTATGTGGCTAAGTATGAACGCATGGGATGGAGCAAGGTGCTATCGTCGTTGCCTGAAAATCCGACGGCGGACATCCCGGCGGAGGAAGCAAGAACGTGCTTCAAGAATTTCAACGCCGAAGTCACTGAAACGTGCAAGAAACAGTCCTTGTGGATTGCTTCGGACTCGAAGCTGCGAGACGAAATCAAAGCTTCGATTTCGTCAAAGCTGGTCCAGAGGTACCGGCAATTCTACGAGAAGAATCGGGTCGGGTTGAGAAGACAACTCGGGTGGAATTCGGTTCTGAAGATTTCACCCGAGGATTTAGAGAATTACCTGTCTGCGATTTTGTGTGGACTTGGAGATTCAGACAGCGTTTCGTCTCATTCTTCTTCGTCTTCTCATCGCTCCAACCGTTCTTGA	1881	0.4992	MPRKGMRNIFFKPSSPSPSSDSVSIMPPSSPLRTFSDSLIDENIDFARSIINKWDSNQSSYARIASLFSGARQEARQYLNAVRDLQSAMRYLVAKDSTSEKLVQAQRLMQVALKRLEEEFYQILSSNREHLDPESVSSHSSTDQRTSVSDFDDDFSEDESRSVAGSSISETERVSMVAMEDLKSIAECMIYVGYGRECVKIYKLTRKSIVDEAIYHLGVERMSFSQVQKMDWGVIELKIKSWLQAVKVAVGTLFYGERILCDHVFATSERVAESCFAEICREAAISLFGLPELVAKCKKTPEKMFRTLDLYEAISDNWQQIESIFSFESTSAIRLQAINSLVKLGEAVRTMLTDFESAIQKETSKTPVPGGGVHPLTRYVMNYITFLADYSGILADIVADWPLTIKSPLPESYFRSPENDNNPSSEISVRLAWLILVVLCKLDGKAELYKDVALSYLFLANNLQYVVDKVRKSNLSFIIGEEWLVKHESKVKEYVAKYERMGWSKVLSSLPENPTADIPAEEARTCFKNFNAEVTETCKKQSLWIASDSKLRDEIKASISSKLVQRYRQFYEKNRVGLRRQLGWNSVLKISPEDLENYLSAILCGLGDSDSVSSHSSSSSHRSNRS	626

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa12g1331	626	Coils	Coil	622	626	-	-
	Bisa12g1331	626	Gene3D	Exocyst complex component Exo70	49	607	-	-
	Bisa12g1331	626	Pfam	Exo70 exocyst complex subunit	240	600	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Bisa12g1331	626	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	34	596	IPR004140	GO:0000145\|GO:0006887
	Bisa12g1331	626	MobiDBLite	consensus disorder prediction	1	27	-	-
	Bisa12g1331	626	SUPERFAMILY	Cullin repeat-like	72	601	IPR016159	-
	Bisa12g1331	626	MobiDBLite	consensus disorder prediction	131	167	-	-
	Bisa12g1331	626	FunFam	Exocyst subunit Exo70 family protein	61	611	-	-
	Bisa12g1331	626	MobiDBLite	consensus disorder prediction	12	27	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa12g1331	Bisa-ChrBisa12	22939989	22941869	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa12g1331	27	605	EXO70 exocyst subunit family	AT5G59730	49.331	0.0	569