Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1319 ATGGAGCAATCGGATAAATCACCGAAGACGTCATCGCAGAGATCGCCATTTCCGAGAGATCCTCGGGGTTCGCTTGAAGTCTTCAACCCTTCCTCCTACTCGACAGAGAATCCGGCCGGCTCGCCGTTCCGATCTCAGCCGAAATGGAAGACGTGGGTAGAGCCGCCGTCCGGCACCGCCGGCACCGCTCACAAGGATGACGTCACCAGCACGTCGTGGATGGCCCTTAGGGACTCCAGCAAACCAGGCACGCAAACCCTAGCTGGCATCCTCGACGACCCGACGCCGGCCGCCGCGGGAGTCACCGGAGACGTCGGCGCTGCTGCTCAGAGGGCGGCCGAGTGGGGATTGGTACTGAAGATGGACACGGAGACGGGGAGGCCGCAGGGAGTGGCGGTAAGGAACTCCGGCGGGGAGGAATCGAGCGCCAAGCTGGCGGGCACTTCGAGGAGGAACTCGAACAACTCGGTGAGAAGCTCCGGCGACTCGTCGGACGACGGCGCGAAGGAGTTGCGGGGAATCCCGAGAGTGTCCGAGGACCTGAAGGACGCTCTGTCGATGTTCCAACAGACCTTTGTGGTGTCGGATGCTACCAAACCCGATTACCCGATCCTGTATGCCAGCGCCGGATTCTTCAAGATGACGGGTTATACTTCCAGGGAGGTCGTCGGAAGGAATTGTCGGTTTTTACAGGGGGCGGATACGGATCCCGATGACGTGGCAAAGATAAGGGAGACGTTGCAAGCTGGCACGAGCTACTGCGGAAGATTACTGAACTACAAGAAGGATGGGACGCCCTTTTGGAACCTCCTCACTATTTCGCCCATCAAAGATGATGACGGAAGAGTTATCAAATTCATCGGGATGCAAGTGGAGGTTAGTAAGCATACGGAGGGGTCCAAGGAGAAGATGCTACGCCCCAATGGATTGCCCGGCTCTTTGATTCGATATGATGCTCGTCAGAAAGAGAAGGCTACCACCTCAGTATCCGAGTTGGTGCAGGCCGTGAGGCGGCCACGGGCACTCAGTGAATCAGCAAACCGTCCATTGATCAGAAAATCGGAAGGTGGTGGAGAAGAAGAGAGAGCAGAAAGTTTATCACGGAGAAAGTCGGAGAGCATGGCTACATTCAAGCCAAAATCACATGGGGAACGTAGAAATTCAATGCAGCGAATCAATGAGATACCTGAAAAGAAACAGAAAAATTCCCGTCGGCGTTCTTTCATGGGGTTCATTAAGAAAAGTCAGACCAATGATGAAAGTTCTGAGGAAGATGAAGTTGTTGAGGAAAGCTCCGAGAGTGAGGAAGATGAGAGGCCTGAGAGTATTGATGACAAAGAAACGCAAAGGGAAAAGCGAAAGGGTCTTGATCTTGCAACCACACTGGAACGTATTGAGAAGAACTTTGTCATTACTGATCCAAGACTGCCTGACAATCCCATCATCTTTGCATCTGATAGCTTCCTAGAACTTACAGAGTACAGTCGTGAAGAAATTTTGGGAAGAAATTGCAGGTTTCTGCAAGGACCTGAAACTGATCCAGCAACTGTGCAAAAAATTAGAGAGGCTATTAACAACCAAACGGATGTTACTGTGCAGCTTATTAATTATACAAAGAGTGGCAAAAAGTTCTGGAACCTATTTCATCTCCAACCTATGCGTGACCAGAAGGGAGAAGTACAGTATTTTATTGGTGTTCAACTTGATGGTAGTCAGCATGTGGAACCTCTTCACAACTGTATTGCAGAAGAGACCGCGAAGGAGGGAGAACATTTGGTAAAACAAACTGCGGAAAATGTTAATGAGGCAGTGAAAGAACTTCCAGATGCAAATTTGAAACCAGAAGATTTATGGTTAAATCATTCAAAAGTGGTCCACCCAAAACCTCATAGGAAAGACAACCGTGCTTGGATAGCTATCCAGAAGATCCTAGATAGTGGAGAACAGATAGGCTTGGATCATTTTAGACCAGTAAGACCTTTGGGATCGGGAGATACTGGCAGTGTGCATCTGGTGGAGCTACGTGGAACTGGTCAATATTTTGCTATGAAGGCTATGGATAAAGGCGTTATGCTCAATCGTAATAAGGTACATAGAGCTTGCACAGAGAGAGAAATCCTCGACATGTTGGACCACCCTTTTCTTCCTGCATTATATGCTTCTTTTCAGACCAAATCACATGTTTGTCTGATAACTGATTATTGTCCTGGTGGAGAACTGTTCCTGCTTCTGGATCGACAGCCAACAAAGGTACTCAAGGAAGATGCAGCTAGATTTTATGCTGCTGAGGTAGTGGTTGCATTGGAGTACCTCCATTATCAAGGAATAATATATCGGGATTTGAAGCCAGAAAATGTGTTACTACAGAGAAATGGGCACGTGTCACTGACAGATTTTGATTTGTCATGTTTAACATCTTGCAAACCACAGCTTCTAATTCCACCCAAAATTGAAAAGAAGAAACAACGGAAGAAAAAAGGCCAAGAGGCTCCAATTTTTATGGCTGAGCCTATGAGAGCGTCGAATTCTTTTGTTGGCACAGAAGAGTACATTGCTCCGGAAATTATAACTGGTTCAGGTCATACTAGTGCCGTGGATTGGTGGGCTCTTGGTATTCTTCTATATGAAATGATGTATGGATATACACCATTCAGGGGAAAGACAAGGCAAAAAACATTTGCAAATATTCTTCACAAAGATCTTAAATTTCCCAAGAGTAAACCGGTTAGTCTCCATGGAAAGCAATTAATGTACCGGTTATTGCACAGAGATCCAAAACACCGATTGGGATCACAGGAAGGAGCAAATGAAATAAAGCGTCACCCATTCTTCCGAGGTGTCAATTGGCCCCTCGTTCGTTGCATGAACCCTCCTGAGCTCGAGGCTCCTCTCTTTGGGGCATCTGAAGATGACAAAGAAGTCAGAATGGTTGATCCTGCGCTGGAGGATCTACAGACAAATTATTTCTGA 2970 0.4774 MEQSDKSPKTSSQRSPFPRDPRGSLEVFNPSSYSTENPAGSPFRSQPKWKTWVEPPSGTAGTAHKDDVTSTSWMALRDSSKPGTQTLAGILDDPTPAAAGVTGDVGAAAQRAAEWGLVLKMDTETGRPQGVAVRNSGGEESSAKLAGTSRRNSNNSVRSSGDSSDDGAKELRGIPRVSEDLKDALSMFQQTFVVSDATKPDYPILYASAGFFKMTGYTSREVVGRNCRFLQGADTDPDDVAKIRETLQAGTSYCGRLLNYKKDGTPFWNLLTISPIKDDDGRVIKFIGMQVEVSKHTEGSKEKMLRPNGLPGSLIRYDARQKEKATTSVSELVQAVRRPRALSESANRPLIRKSEGGGEEERAESLSRRKSESMATFKPKSHGERRNSMQRINEIPEKKQKNSRRRSFMGFIKKSQTNDESSEEDEVVEESSESEEDERPESIDDKETQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVQKIREAINNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNCIAEETAKEGEHLVKQTAENVNEAVKELPDANLKPEDLWLNHSKVVHPKPHRKDNRAWIAIQKILDSGEQIGLDHFRPVRPLGSGDTGSVHLVELRGTGQYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKSHVCLITDYCPGGELFLLLDRQPTKVLKEDAARFYAAEVVVALEYLHYQGIIYRDLKPENVLLQRNGHVSLTDFDLSCLTSCKPQLLIPPKIEKKKQRKKKGQEAPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMMYGYTPFRGKTRQKTFANILHKDLKFPKSKPVSLHGKQLMYRLLHRDPKHRLGSQEGANEIKRHPFFRGVNWPLVRCMNPPELEAPLFGASEDDKEVRMVDPALEDLQTNYF 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1319 989 MobiDBLite consensus disorder prediction 340 455 - -
Bisa12g1319 989 SMART pac_2 531 573 IPR001610 -
Bisa12g1319 989 SMART pac_2 254 296 IPR001610 -
Bisa12g1319 989 SUPERFAMILY PYP-like sensor domain (PAS domain) 198 290 IPR035965 -
Bisa12g1319 989 CDD PAS 469 569 IPR000014 -
Bisa12g1319 989 SMART serkin_6 655 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1319 989 PANTHER FLIPPASE KINASE 1-RELATED 421 962 - -
Bisa12g1319 989 MobiDBLite consensus disorder prediction 1 18 - -
Bisa12g1319 989 FunFam Putative LOV domain-containing protein 739 956 - -
Bisa12g1319 989 FunFam LOV domain-containing protein 654 738 - -
Bisa12g1319 989 SMART pas_2 456 525 IPR000014 -
Bisa12g1319 989 SMART pas_2 179 248 IPR000014 -
Bisa12g1319 989 CDD STKc_phototropin_like 653 963 - -
Bisa12g1319 989 ProSiteProfiles Protein kinase domain profile. 655 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1319 989 MobiDBLite consensus disorder prediction 27 44 - -
Bisa12g1319 989 Gene3D Phosphorylase Kinase; domain 1 654 738 - -
Bisa12g1319 989 ProSiteProfiles PAC domain profile. 251 305 IPR000700 -
Bisa12g1319 989 SUPERFAMILY Protein kinase-like (PK-like) 635 965 IPR011009 -
Bisa12g1319 989 SUPERFAMILY PYP-like sensor domain (PAS domain) 470 569 IPR035965 -
Bisa12g1319 989 Gene3D PAS domain 442 607 - -
Bisa12g1319 989 MobiDBLite consensus disorder prediction 1 69 - -
Bisa12g1319 989 FunFam LOV domain-containing protein 443 607 - -
Bisa12g1319 989 ProSiteProfiles PAS repeat profile. 177 248 IPR000014 -
Bisa12g1319 989 MobiDBLite consensus disorder prediction 141 162 - -
Bisa12g1319 989 ProSiteProfiles PAS repeat profile. 454 527 IPR000014 -
Bisa12g1319 989 ProSitePatterns Protein kinases ATP-binding region signature. 661 684 IPR017441 GO:0005524
Bisa12g1319 989 Gene3D Transferase(Phosphotransferase) domain 1 739 953 - -
Bisa12g1319 989 MobiDBLite consensus disorder prediction 128 170 - -
Bisa12g1319 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 776 788 IPR008271 GO:0004672|GO:0006468
Bisa12g1319 989 FunFam Putative LOV domain-containing protein 191 347 - -
Bisa12g1319 989 CDD PAS 204 293 IPR000014 -
Bisa12g1319 989 MobiDBLite consensus disorder prediction 422 442 - -
Bisa12g1319 989 Pfam Protein kinase domain 658 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1319 989 Pfam PAS domain 198 294 IPR000014 -
Bisa12g1319 989 Pfam PAS domain 477 569 IPR000014 -
Bisa12g1319 989 MobiDBLite consensus disorder prediction 353 404 - -
Bisa12g1319 989 NCBIfam PAS domain S-box protein 479 569 IPR000014 -
Bisa12g1319 989 NCBIfam PAS domain S-box protein 204 297 IPR000014 -
Bisa12g1319 989 Gene3D PAS domain 191 349 - -
Bisa12g1319 989 ProSiteProfiles PAC domain profile. 528 582 IPR000700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1319 Bisa-ChrBisa12 22687267 22699331 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1319 1 989 AGC Kinase Gene Family AT3G45780 70.356 0.0 1374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bisa12g1319 Pkinase 2.1e-63 CL0016