Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1315 ATGCTGCCGCGCCCACCTGAAACCCCCTCTTCGTTAACTAATTGGTTGGTTGATGTTGGCGCTCACGGTGACCGTGCCGGTGCCGTTAAGGCGGCTAAGCTGGGAGCCGCGTGGCGTGCATCACTGACGGCTCCGTTACGGTTGGCCGATGTGGAAGTGCGTCAGTGCGATACGCGTAGGCAATCTCGGCCCCACGCGTGGCGTCATCATGTGGGCCCGCTTGTAATGGTCGAGAAGTTGACCATTTTCCTTTTTAATTTAATGGGAGGGAAATCGAACGGTCCAGAAAAGCGCGTTGGTGTAACTTGTGCGCCACCGGCGGACGATACGATACGAGAGACAAATTTATATTGCATACCAGCTCGCACCAAATCGATGAACGGACAATCAGAAAGCGCCACGTTAGCGAAGCTCTGTTTTCTTTGTGTATTTGGACTAAGAAGGGCCATGGGTTGCTTTTGTTTTACAAAAAAATCGAGCAGAGAATCGTCGAGCAATGACTATAGCCAGAGCAAAAGGCCGAACGAAAACAATCTCACAGATACGGTGAAAGTTGATTTGAATCCAAATGCAACGAAGGAAACTAATTCTAAGGACGATCAACTTTCTCAGGACGTGAAGAATTTAAATTTAATAGACGATGGAAAAGCTAATGCTAGCCGGGCACAAACATTTACTTTTGAGGAACTTGCAGCGGCAACAGGAAATTTTAGGTTAGATTGCTTTCTGGGAGAGGGAGGGTTTGGCAAGGTTTACAAGGGGCACTTGGAGAGAATAAACCAGGTTGTAGCTATAAAACAACTTGACCCTAATGGACTTCAAGGGATTCGGGAATTTGTTGTTGAAGTGTTGACACTTAGTCTGGCTGACCATCCTAATCTCGTCAAATTGATTGGGTTTTGTGCTGAGGGAGAGCAGAGGCTATTGGTATATGAGTACATGCCATTAGGATCTTTGGAGAACCATTTGCATGATCTTGCGCCTGGTAGGAAACCGCTTGATTGGAATACAAGAATGAAAATAGCTGCTGGCGCTGCTAAGGGCTTGGAGTATTTGCATGAGAAAATGAAGCCCCCTGTCATTTACCGTGACCTGAAATGCTCAAACATATTATTAGGCGAGGGATATCATCCGAAGTTATCTGACTTTGGCTTGGCGAAAGTAGGCCCAAGTGGGGATAAGACCCATGTTTCGACAAGGGTTATGGGCACATATGGGTACTGTGCTCCAGATTATGCAATGACAGGTCAGTTGACATTCAAGTCAGATATCTACAGCTTTGGGGTTGTTCTTTTGGAACTCATCACAGGCAGGAAAGCCATTGATAATACAAGACCTGGCAAAGAACAAAATCTGGTTGCATGGGCAAGGCCGTTATTCAAAGACCGAAGAAAATTCTCACAAATGGTTGATCCATTGCTTGAAGGTCAATATCCTGTGAGAGGGTTATACCAAGCTCTGGCTATTGCTGCTATGTGTGTTCAAGAGCAGCCTAATATGCGGCCTGTGATAACCGACGTCGTCACAGCATTAAATTACCTTGCTTCCCAGAAACACGATCCCCGAGTTCATCAAGTACAGAACAACAGAAGAAGGGATGATGATGAAAGACATTTTGTTGGTAATGGACCTGACACAGACAGATATACAGATCTATAG 1659 0.4593 MLPRPPETPSSLTNWLVDVGAHGDRAGAVKAAKLGAAWRASLTAPLRLADVEVRQCDTRRQSRPHAWRHHVGPLVMVEKLTIFLFNLMGGKSNGPEKRVGVTCAPPADDTIRETNLYCIPARTKSMNGQSESATLAKLCFLCVFGLRRAMGCFCFTKKSSRESSSNDYSQSKRPNENNLTDTVKVDLNPNATKETNSKDDQLSQDVKNLNLIDDGKANASRAQTFTFEELAAATGNFRLDCFLGEGGFGKVYKGHLERINQVVAIKQLDPNGLQGIREFVVEVLTLSLADHPNLVKLIGFCAEGEQRLLVYEYMPLGSLENHLHDLAPGRKPLDWNTRMKIAAGAAKGLEYLHEKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTRPGKEQNLVAWARPLFKDRRKFSQMVDPLLEGQYPVRGLYQALAIAAMCVQEQPNMRPVITDVVTALNYLASQKHDPRVHQVQNNRRRDDDERHFVGNGPDTDRYTDL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1315 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672|GO:0006468
Bisa12g1315 552 Pfam Protein tyrosine and serine/threonine kinase 240 509 IPR001245 GO:0004672|GO:0006468
Bisa12g1315 552 MobiDBLite consensus disorder prediction 523 552 - -
Bisa12g1315 552 MobiDBLite consensus disorder prediction 519 552 - -
Bisa12g1315 552 FunFam probable serine/threonine-protein kinase RLCKVII 210 313 - -
Bisa12g1315 552 PANTHER OS07G0668900 PROTEIN 154 522 - -
Bisa12g1315 552 CDD STKc_IRAK 243 512 - -
Bisa12g1315 552 Gene3D Phosphorylase Kinase; domain 1 208 313 - -
Bisa12g1315 552 MobiDBLite consensus disorder prediction 159 201 - -
Bisa12g1315 552 SMART serkin_6 237 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1315 552 FunFam Serine/threonine-protein kinase PBS1 314 529 - -
Bisa12g1315 552 Gene3D Transferase(Phosphotransferase) domain 1 314 539 - -
Bisa12g1315 552 SUPERFAMILY Protein kinase-like (PK-like) 223 527 IPR011009 -
Bisa12g1315 552 ProSitePatterns Protein kinases ATP-binding region signature. 243 266 IPR017441 GO:0005524
Bisa12g1315 552 ProSiteProfiles Protein kinase domain profile. 237 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1315 Bisa-ChrBisa12 22660068 22664326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1315 150 516 Glycoside Hydrolase AT3G07070 58.065 4.49e-148 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bisa12g1315 PK_Tyr_Ser-Thr 7.1e-43 CL0016