Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1311 ATGGAAAATACTGAACCGCTCCACATCAAATCCGCGGGGGTTCCGATTCACGGTGGCAAATACGTGAGGTACAACATCCTCGGTAATCCCTTCGAGGTCTACGCAAAGTACGCGCCGCCTATAAAGCCCGTCGGACGCGGCGCTTACGGCATCGTCTGCTGTGCGACGAATTCCGAGACTAAGGAAGAGGTCGCGATCAAGAAGATCGGGAATGCCTTCGACAACAGGATCGATGCCAAGAGGACACTTCGAGAAATCAAACTTCTTTGTCATATGGATCACGATAATATTGTTAAAATTAAGGACATAATACGGCCTCCAGAGAGGCAAAATTTCAACGATGTTTACGTTGTATATGAATTGATGGATACTGACCTACATCAGATCATACGTTCTACCCAGGAGCTCGCAGATGAGCATTGTCAGTACTTCCTTTATCAGCTATTGAGGGGATTGAAGTACATACACTCTGCGAATGTTTTGCACCGAGATCTAAAACCTAGCAATCTACTTCTCAATGCAAACTGTGACCTCAAGATCTGTGACTTTGGGCTAGCCAGAACTACCTCTGAGACAGACTTTATGACGGAATATGTTGTGACTCGCTGGTACAGGGCTCCTGAATTGCTATTGAATTGTTCAGAATACACAGCAGCCATTGATATATGGTCCGTTGGTTGCATTTTGATGGAGATAATCAGAAGGGAGCCTCTATTTGCCGGTAAAGATTATGTGCAGCAGTTGACGCTTATAACCGAGTTACTAGGTTCACCAGATGATTCAGATCTTGGATTCCTGCGAAGTGCTAATGCGAAGAAATATGTTAAGCAGCTGCCACATGTGGAAAAGCAACCCTTTGCACGCAGGTTTCCTGATGTGTCGCCGTTGGCAATTGATCTTGCTGAGAAAATGTTGGTTTTCGATCCGGCCAAACGAATAACTGTGGAAGAAGCATTGAATCACCCATATTTGTCAAGTCTTCATGAGATCAACGAGGAGCCCATTTGCCCAACTCCTTTCGTCTTTGACTTTGAACAGATAACTCTGAACGAAGAAGATATAAAGGAGCTCATATGGAGGGAGTCTCTGAACTTCCACCCAGATGAGATGGTGGAATAG 1119 0.4513 MENTEPLHIKSAGVPIHGGKYVRYNILGNPFEVYAKYAPPIKPVGRGAYGIVCCATNSETKEEVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHDNIVKIKDIIRPPERQNFNDVYVVYELMDTDLHQIIRSTQELADEHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIIRREPLFAGKDYVQQLTLITELLGSPDDSDLGFLRSANAKKYVKQLPHVEKQPFARRFPDVSPLAIDLAEKMLVFDPAKRITVEEALNHPYLSSLHEINEEPICPTPFVFDFEQITLNEEDIKELIWRESLNFHPDEMVE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1311 372 SUPERFAMILY Protein kinase-like (PK-like) 41 330 IPR011009 -
Bisa12g1311 372 Pfam Protein kinase domain 42 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1311 372 ProSitePatterns MAP kinase signature. 73 176 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bisa12g1311 372 CDD STKc_TEY_MAPK 31 367 - -
Bisa12g1311 372 ProSitePatterns Protein kinases ATP-binding region signature. 44 68 IPR017441 GO:0005524
Bisa12g1311 372 FunFam Mitogen-activated protein kinase 122 351 - -
Bisa12g1311 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Bisa12g1311 372 ProSiteProfiles Protein kinase domain profile. 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1311 372 SMART serkin_6 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1311 372 Gene3D Transferase(Phosphotransferase) domain 1 122 351 - -
Bisa12g1311 372 Gene3D Phosphorylase Kinase; domain 1 21 361 - -
Bisa12g1311 372 FunFam Mitogen-activated protein kinase 23 132 - -
Bisa12g1311 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 37 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1311 Bisa-ChrBisa12 22592373 22594632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1311 10 365 MAP Kinase Gene Family AT1G07880 79.213 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Bisa12g1311 Pkinase 5.9e-71 CL0016