Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1300 ATGGTCCACCAAACTTTGCTAATGATTTCAAGAATTTTAGCCATGGGCAAGTCATACCCAACGGTGAGTCCTGATTACCAGAAGGCCGTGGAGAAGGCCAAGAAGAAGCTCAGAGGTCTGATCGCCGAGAAGAACTGTGCTCCGATCATGCTCCGTTTAGCGTGGCACTCAGCTGGGACCTATGACGTGAAGACGAAGACCGGTGGTCCCTTTGGAACCATCAAGCACCCGGCTGAACTTGCACACGGGGCTAACAATGGGCTTGATATTGCTGTTAGGTTGTTGGAGCCCATCAAGGCGCAGTTCCCCATCTTGACTTATGCTGATTTCTACCAGTTGGCTGGGGTAGTTGCTGTTGAGGTCACCGGTGGGCCTGAAATTCCTTTCCACCCGGGAAGAGAGGACAAGCCTGAGCCGCCTCCCGAGGGCCGCTTGCCTGATGCAACAAAGGGTACTGACCATTTGAGGGATGTGTTTGGCCATCATATGGGGCTTAGCGATCAAGATATTGTTGCTCTTTCTGGTGGTCACACACTTGGAAGGTGCCACAAGGAGCGTTCTGGATTTGAGGGTGCCTGGACTTCCAACCCTCTCATTTTTGACAACACATACTTCACGGAACTCTTGAGTGGTGAGAAAGAAGGCCTCCTGCAGCTGCCATCTGACAAGGCACTCTTGAGTGACCCAGTATTCCGCCCTCTTGTCGAGAAATATGCAGCGGATGAGGATGCGTTCTTTGCTGATTATGCTGAGGCACATCTAAAACTCTCTGAACTTGGGTTTGCTGAGGCTTAA 795 0.5145 MVHQTLLMISRILAMGKSYPTVSPDYQKAVEKAKKKLRGLIAEKNCAPIMLRLAWHSAGTYDVKTKTGGPFGTIKHPAELAHGANNGLDIAVRLLEPIKAQFPILTYADFYQLAGVVAVEVTGGPEIPFHPGREDKPEPPPEGRLPDATKGTDHLRDVFGHHMGLSDQDIVALSGGHTLGRCHKERSGFEGAWTSNPLIFDNTYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFAEA 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1300 264 PRINTS Haem peroxidase superfamily signature 47 61 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 PRINTS Haem peroxidase superfamily signature 123 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 PRINTS Haem peroxidase superfamily signature 105 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 PRINTS Haem peroxidase superfamily signature 169 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 SUPERFAMILY Heme-dependent peroxidases 18 260 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 23 260 IPR044831 GO:0004601|GO:0034599
Bisa12g1300 264 ProSitePatterns Peroxidases active site signature. 47 58 IPR019794 GO:0004601
Bisa12g1300 264 MobiDBLite consensus disorder prediction 129 150 - -
Bisa12g1300 264 FunFam L-ascorbate peroxidase, cytosolic 146 253 - -
Bisa12g1300 264 FunFam Cytosolic ascorbate peroxidase 33 150 - -
Bisa12g1300 264 MobiDBLite consensus disorder prediction 127 150 - -
Bisa12g1300 264 ProSitePatterns Peroxidases proximal heme-ligand signature. 169 179 IPR019793 -
Bisa12g1300 264 Pfam Peroxidase 34 241 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 ProSiteProfiles Plant heme peroxidase family profile. 88 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 Gene3D Peroxidase, domain 2 146 253 - -
Bisa12g1300 264 CDD ascorbate_peroxidase 19 264 - -
Bisa12g1300 264 PRINTS Plant ascorbate peroxidase signature 47 62 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 PRINTS Plant ascorbate peroxidase signature 104 122 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 PRINTS Plant ascorbate peroxidase signature 185 209 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 PRINTS Plant ascorbate peroxidase signature 144 161 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 PRINTS Plant ascorbate peroxidase signature 79 103 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 PRINTS Plant ascorbate peroxidase signature 163 184 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 PRINTS Plant ascorbate peroxidase signature 26 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 PRINTS Plant ascorbate peroxidase signature 65 75 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 PRINTS Plant ascorbate peroxidase signature 237 261 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 PRINTS Plant ascorbate peroxidase signature 123 135 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa12g1300 264 Gene3D - 33 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1300 Bisa-ChrBisa12 22334957 22337959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1300 87 256 Peroxidase AT4G16270 31.280 6.17e-18 80.5