Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1299 ATGGCTAACGTTATTCCGAACACAGTCGCCGATTTTCCAGCTGTTCCGATGCACGGAGGAAAGTTCATTCAGTACAATATATTCGGAAACTTCTTCGAAGTCACGGCCAAGTATCGCCCTCCGATCATGCCTATTGGTCGCGGCGCCTACGGAATCGTCTGCTCGCTTTTGAATACCGGAACTAACGAGATGGTAGCTATTAAGAAGATAGCGAACACTTTTGACAATTACTTGGACGCTAAGCGTACGCTCCGTGAGATTAAGCTTCTTCGGCATTTGGATCATGAAAATGTAATTGCTTTAAGAGATGTGATTCCTCCGCCATTGCGTAGAGAGTTTACTGATGTCTACATAGCCACGGAACTCATGGATACTGATCTTCACCACATCATTCGCTCTAATCATAATCTTTCAGAGGAGCACTGCCAGATTCTTCGCGGACTGAAGTATATACATTCTGCAAATATTATCCATAGAGATTTGAAACCAAGCAATTTGTTGCTGAACGAAAACTGCGATTTGAAGATATGTGATTTTGGGCTTGCGCGTGCTACTTTAGAAAATGATTTAATGACAGAATATGTCGTCACAAGATGGTATAGGGCTCCTGAACTATTGTTGAACGCCTCAGACTACACATCTGCAATAGATGTGTGGTCTGTGGGTTGCATCTTTATGGAACTTATGAATAAAAAACCTCTGTTTCCGGGCAGAGATCATGTGCATCAGATGTGCCTATTGACAGAGCTTCTTGGCACACCAACTGAAGCTGACCTTGGACTAATTAAAAATGAGGATGTGAGAAGATATATCCGACAACTTCCACAATATCCTCGTCAACCATTAGCTAAGGTGTTCCCTCATGTCCATCCCTCAGCCATGGATCTCATTGATAGAATGTTAACGATTGACCCTACTAGAAGAATTACAGTTGAAGAGGCATTAGCACATCCATACCTTGCAAATTTACATGATGTCACTGATGAACCAATCTGCCCCGAGGTATTCTCATTTGATTTTGAGCAACAACTCTTGGAAGAAGAACAAATTAAAGATATGATCTACAAGGAGGCATTGGCACTCAATCCAGAGTATGCGTGA 1101 0.4233 MANVIPNTVADFPAVPMHGGKFIQYNIFGNFFEVTAKYRPPIMPIGRGAYGIVCSLLNTGTNEMVAIKKIANTFDNYLDAKRTLREIKLLRHLDHENVIALRDVIPPPLRREFTDVYIATELMDTDLHHIIRSNHNLSEEHCQILRGLKYIHSANIIHRDLKPSNLLLNENCDLKICDFGLARATLENDLMTEYVVTRWYRAPELLLNASDYTSAIDVWSVGCIFMELMNKKPLFPGRDHVHQMCLLTELLGTPTEADLGLIKNEDVRRYIRQLPQYPRQPLAKVFPHVHPSAMDLIDRMLTIDPTRRITVEEALAHPYLANLHDVTDEPICPEVFSFDFEQQLLEEEQIKDMIYKEALALNPEYA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1299 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Bisa12g1299 366 SUPERFAMILY Protein kinase-like (PK-like) 44 329 IPR011009 -
Bisa12g1299 366 FunFam Mitogen-activated protein kinase 123 347 - -
Bisa12g1299 366 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 321 - -
Bisa12g1299 366 Gene3D Phosphorylase Kinase; domain 1 22 357 - -
Bisa12g1299 366 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
Bisa12g1299 366 FunFam Mitogen-activated protein kinase 24 133 - -
Bisa12g1299 366 Gene3D Transferase(Phosphotransferase) domain 1 123 347 - -
Bisa12g1299 366 Pfam Protein kinase domain 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1299 366 ProSitePatterns MAP kinase signature. 74 172 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bisa12g1299 366 SMART serkin_6 39 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1299 366 ProSiteProfiles Protein kinase domain profile. 39 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1299 Bisa-ChrBisa12 22320017 22324301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1299 3 366 MAP Kinase Gene Family AT3G45640 77.778 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Bisa12g1299 Pkinase 4.2e-68 CL0016