Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1296 ATGGTTACTGGCAAAATGGAACAGTTCGTCGACAACATGCCGGCGATGGATCTGATGCGCTCCGAGAAGATGACCTTCGTTCAACTCATCATCCCCGTCGAGTCCGCTCATCGGGCCGTCTCTTATTTAGGCGAACTCGGTCTCCTCCAATTCCGAGATTTAAATGTTGATAAAAGCCCTTTTCAGAGAACATTTGTTAATCAGGTAAAGCGATGCGCAGAAATGTCAAGAAAGCTACGATTCTTCAAAGATCAAATCAGTAAAGCTGGTCTTATGTCTTCTCCTAATCCTGTCTTGCAACCAGATATTGAGTTGGAGGAACTAGAGTATCAACTCGCTGAGCATGAACATGAACTAATTGAAATGAACTCTAATAGCGAGAAACTTCGGCAATCATATAATGAGCTCCTGGAGTTTAAGATTGTATTGCAAAAGGCATGTGGTTTTCTTGTGGCAAATTATAGCCATGCATTTGCAGAGGAGAGAGAGCTGGAGGAGAATGTGTATTCAGGTGATGGCTATGTTGAGAAAGCATCTTTGCTTGAACAGGAAGTAAGGTCTGGATCATCAAATCAATCTGGTTTAAGATTTATTAGTGGGATAATTTGTAAATCCAAGGTTCTTAGGTTTGAAAGGATGCTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCAGCAGCTGATGAGCAAATTGCAGATCCTGTTTCAAATGAGATGATCGAGAAAACCGTGTTTGTTGTGTTTTTCTCTGGGGAACAGGCAAGAACAAAGATTCTGAAAATCTGTGATGCGTTCGGGGCAAATTGTTACCCTGTCCCTGAAGATATAAGTAAACAGAGGCAAATAACTAGGGAGGTTTCATCACGGCTTTCTGACTTGGAGGCAACTTTGGATGCTGGAATTAGGCACCGGAATAAAGCCCTTGCTTCTGTAGGGGTTCATCTAACAAAATGGATGAACATGGTAAGAAGAGAGAAGGCTGTTTATGATACCCTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTTGTAGGAGAGGGCTGGTACCCCGTATTTGCAACAGTACAGATTAAGGAGGTATTGCAGCGTGCAACTCTTGATAGCAATTCTCAAGTTGGCATAATCTTCCATCCAATGGATGCAGTGGAATCTCCACCCACTTATTTTAGGACCAACCATTTTACCAGTGCGTATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATACCAAGAAGCAAATCCCGCAGTTTACACAGTTATTACATTCCCATTTCTTTTTGCGGTGATGTTTGGGGACTGGGGTCATGGAATTTGCTTGTTGCTGGGAGCATTGGTTCTTATAGCACGTGAAAGCAGGCTCAGTACACAGAGACTTGGAAGCTTTATGGAAATGCTATTTGGTGGGCGCTATGTGCTTCTTTTGATGTCACTGTTTTCAATTTATTGTGGGTTAATCTACAATGAATTCTTCTCTGTTCCTTTTCACATTTTTGGTGGCTCTGCTTATGCATGTCGAGATGCTACATGCAGGGATGCACACACTGCTGGCTTAGTCAAGTACCGAGATCCATACCCATTTGGTGTGGACCCTAGCTGGCGTGGAAGTCGTTCAGAACTGCCTTTTCTCAACTCTCTCAAGATGAAGATGTCCATTCTGTTGGGTGTGGCACAAATGAACTTGGGGATTATAATGAGTTACTTCAATGCACGTTTTTTTAGCAGTTCACTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTAAACAGTCTATTTGGGTATCTTTCTCTTCTCATCATTGTTAAGTGGTGTACTGGTTCTCAGGCGGACCTCTATCATGTAATGATTTACATGTTTCTTAGCCCCACTGATAATCTTGGTGAGAATCAGTTGTTCTGGGGCCAAAGGCCACTTCAAATTTTGTTATTGCTTTTGGCTCTAATCGCAGTTCCTTGGATGCTATTTCCAAAACCTTTTATACTAAGGAAGCTTCACTTGGAGAGATTCCAAGGACGCACTTATGGTATGCTTACTACCTCTGAAGTGGATCTTGAAATGGAACCAGATTCTGCAAGGCATCATCACGAGGAATTCAATTTCAGTGAGGTCTTTGTTCACCAAATGATCCACTCAATTGAGTTTGTTCTAGGTGCTGTTTCAAATACTGCATCATATCTTCGACTTTGGGCATTAAGCTTGGCTCACTCAGAACTTTCTACCGTTTTTTATGAGAAAGTATTGCTTCTTGCTTGGGGGTATGACAATCTTGTTATCCGGTTAGTGGGGCTAGCCGTTTTTGCCTTTGCAACTGCCTTTATACTTCTCATGATGGAGACCCTTAGTGCCTTTCTTCATGCCCTCCGTCTTCACTGGGTAGAATTTCAAAACAAATTCTACTATGGTGATGGCTATAAGTTCAGACCTTTTTCCTTTGCTTCCAAAACAGAGGATGATGATTGA 2475 0.419 MVTGKMEQFVDNMPAMDLMRSEKMTFVQLIIPVESAHRAVSYLGELGLLQFRDLNVDKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGLMSSPNPVLQPDIELEELEYQLAEHEHELIEMNSNSEKLRQSYNELLEFKIVLQKACGFLVANYSHAFAEERELEENVYSGDGYVEKASLLEQEVRSGSSNQSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAAADEQIADPVSNEMIEKTVFVVFFSGEQARTKILKICDAFGANCYPVPEDISKQRQITREVSSRLSDLEATLDAGIRHRNKALASVGVHLTKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWYPVFATVQIKEVLQRATLDSNSQVGIIFHPMDAVESPPTYFRTNHFTSAYQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIARESRLSTQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGGSAYACRDATCRDAHTAGLVKYRDPYPFGVDPSWRGSRSELPFLNSLKMKMSILLGVAQMNLGIIMSYFNARFFSSSLDIRYQFVPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQILLLLLALIAVPWMLFPKPFILRKLHLERFQGRTYGMLTTSEVDLEMEPDSARHHHEEFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYYGDGYKFRPFSFASKTEDDD 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1296 824 PIRSF ATP6V0A1 14 824 IPR026028 GO:0000220|GO:0046961
Bisa12g1296 824 Pfam V-type ATPase 116kDa subunit family 42 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bisa12g1296 824 Coils Coil 105 132 - -
Bisa12g1296 824 PANTHER VACUOLAR PROTON ATPASES 18 823 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1296 Bisa-ChrBisa12 22212909 22225102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1296 6 817 Primary Pumps ATPases(2) AT2G28520 81.840 0.0 1387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1296 12 22212909 22225102 Bisa02g3747 02 90791346 90803905 CCT
Bisa12g1296 12 22212909 22225102 Bisa12g1296 12 22212909 22225102 ECH