Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1295 ATGTCTAGCCAGACACTGGAGACCATGATAGCTTGCTCAAAAGCACAGCAAGAGAGGAAGCCAAGGCCTCAGCCAGAAGAAGCATTGAAGTGCCCAAGATGTGACTCCACCAACACTAAATTCTGTTACTACAACAATTACAGTCTCTCTCAGCCCAGATACTTCTGCAAATCATGCAGGAGATATTGGACCAAAGGAGGAACACTGAGAAACGTTCCAGTAGGTGGAGGCTGCAGGAAGAACAAAAGGTCTTCTTCATCAAAGAGATCTCAAGATCCAACATTACTCCCTCCTCACACCAGCAACAATAACCCACTCAATGCTCTGCCTCCATTATCTTACGACTCAAACGACCTCACTCTGGCGTTAGCTAGGCTCCAAAAGCAGTCTTGTACAACAGGGCAAATGGGTTTCGATGACCATGATCTTTCAATTCTTGGGAACCCCACAAGCAATACCCATTTTGATATTCTTGGCAATCCCTCAAATCCTGGCTTTTTAGATGCGTTTCGGAGTGGGTTCATGGAAACCCAGAATGGGAATCTGCAGAATCTGTACTGTGGATATGGGAATGGGGACATGGGAGAGGTGGATAATAGTAATGCAGAGATGAATATGATGCTTCCCTATGAACAAGAAAACAGTAATGCCCCCACGACTCAAGCAGTGACAGTCACTACCATGAAGCAAGAAATAATGTGCAATGGCAGAGAACAGAGTGAAAGTAATAGGGTGTTGTGGGGCCTCCCATGGCAGCTCAATGGAGATATAAACATGGGAGGGCTTGATTCAGGAAGAGGAAGCTGGAATAATGGTCTCAGTTCATCTTGGCAAGGGCTTCTCAATAGTCCCCTAATGTAA 861 0.4564 MSSQTLETMIACSKAQQERKPRPQPEEALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSKRSQDPTLLPPHTSNNNPLNALPPLSYDSNDLTLALARLQKQSCTTGQMGFDDHDLSILGNPTSNTHFDILGNPSNPGFLDAFRSGFMETQNGNLQNLYCGYGNGDMGEVDNSNAEMNMMLPYEQENSNAPTTQAVTVTTMKQEIMCNGREQSESNRVLWGLPWQLNGDINMGGLDSGRGSWNNGLSSSWQGLLNSPLM 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1295 286 ProSiteProfiles Zinc finger Dof-type profile. 29 83 IPR003851 GO:0003677|GO:0006355
Bisa12g1295 286 MobiDBLite consensus disorder prediction 74 111 - -
Bisa12g1295 286 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 199 IPR045174 GO:0003700|GO:0006355
Bisa12g1295 286 Pfam Dof domain, zinc finger 27 83 IPR003851 GO:0003677|GO:0006355
Bisa12g1295 286 ProSitePatterns Zinc finger Dof-type signature. 31 67 IPR003851 GO:0003677|GO:0006355
Bisa12g1295 286 MobiDBLite consensus disorder prediction 88 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1295 Bisa-ChrBisa12 22173984 22174844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1295 27 286 C2C2-Dof Transcription Factor Family AT2G28510 43.310 1.69e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa12g1295 zf-Dof 4.5e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1295 12 22173984 22174844 Bisa02g3742 02 90708807 90710606 CCT
Bisa12g1295 12 22173984 22174844 Bisa12g1295 12 22173984 22174844 ECH